Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2065 |
Symbol | |
ID | 8358217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2515916 |
End bp | 2516662 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964250 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003121759 |
Protein GI | 256421106 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC AGAGTAAAAC AGTCCTCGTA ACCGGCGGCG GTTCCGGCAT TGGATACGCT ATAGCAAAAT TATTAAGCGA AAAAGGGAAT AAAGTGATTC TCTCCGGTCG CAATGCTGCT AAAATTGAAA AAGCCGCCAA AACTTTAGGG CTTGACTACA TCGTCTGCGA TGTCACCAAT GCGGAGGCCG TTAATAACCT GGTCACAAGA CTTAATACCG ATTACGATGG TTTAAGTGTG TTGATCAATA ATGCAGGCGT AGCCAATTTG TACAAACTAT CTGAAGATGC GCGTGCGTAT GAAAAATCAA AACAGGAATT CGAAACCAAC TATTTCGCGC CGGTAAGACT GACAGAAGCG CTGCTGCCAT TGCTCAAAAA GCAGCCGGAG GCAGCGATCA TCAATATCAC ATCCAATGTG ACCTTCCATC CTTTATTAGT GCTGCCGACG TATTCAGACT CAAAAGCTGC CCTGCATTCC CATACTGTCG CATTGAGATT AAGCCTGTCA AAGGATACCA ACATTAAAGT GTTTGAAGTG ATGCCTTCGC TCATCAACAC AGATGCCACG AAAGACATGG GTGGCGAACA AAATGGCTTA CCGCCACAGG TCGTAGCCGA AGACCTGTAT TATGGTCTTG AGGAAGACCG GTACGAGATC TATGTCGGTG AAACCGGAAA GCAGCGCGAC GCCTATTTTG CAAACCCTGT TGCAGCAGTA GAAAGCTTTA ACCAAGGCTT ATTTTGA
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Protein sequence | MNIQSKTVLV TGGGSGIGYA IAKLLSEKGN KVILSGRNAA KIEKAAKTLG LDYIVCDVTN AEAVNNLVTR LNTDYDGLSV LINNAGVANL YKLSEDARAY EKSKQEFETN YFAPVRLTEA LLPLLKKQPE AAIINITSNV TFHPLLVLPT YSDSKAALHS HTVALRLSLS KDTNIKVFEV MPSLINTDAT KDMGGEQNGL PPQVVAEDLY YGLEEDRYEI YVGETGKQRD AYFANPVAAV ESFNQGLF
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