| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2040 |
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| Symbol | |
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| ID | 8358191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2484116 |
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| End bp | 2490184 |
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| Gene Length | 6069 bp |
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| Protein Length | 2022 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964227 |
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| Product | hypothetical protein |
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| Protein accession | YP_003121736 |
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| Protein GI | 256421083 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0726199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC TTCCCGATCC TATGCGACGT AGCATTGCAG CTGCGTTAAG TAAAGCGCAG
AATGCCCTTT GCAGGATAGT GCTGCCATTA TTTTTATTAC TGTTTATCTG CAGTGAGGTG
AATGCACAGA CTGTCAGGGC TGTGATCAAC CCCACCGGAG GTACACCTGC ATTCAATGAC
CTGAAGATAG AGATTCTCAG TGACGGTGGA ATTAAGGTCA CGCGTAAGGG TTTACTCGAA
AGTTATATCA GAACAGACAG CTCTCAGGGT ATGAGGGCTT TTTTAGATTT TAAGAATAGC
GGCTATCTCG CCAGTGCTAA TCTGAAAAGT CCGACTGTCT GCTATATCTC TCCTGTATCC
GGTACCGGTG AATACTGGGA TCCGTATAAA GTGCACATTG TAGGTACTAT CGTAGACAGG
TATAAAAACT ATCCTACCGG ACAAACCGGT ACGGTTACCA TCATTGTGTC TTACGTGAAG
AATACGAACT ATTTCTTCAT GGACTATGTG CTGCACATGC CGCAGGTCAG TGGTTTCACC
AAAGCTATGC TGTATCAGTC AGAGCAGGTC GTAATGGGTG CTGCCGCGGG AGATGATCCT
GATGCGGCCA GTCCTTGTGC CTATGGCTTT ATGAACGCTG CCGGAACAAC CGTCGGCGTG
TACCGTGATG CCAGCTGTGC TACCACTCCT GAAGCGCCCC GCAGCCACGT ATACCGTGCC
CTGCGTAAAT TCGATTCATG GGAGGTTTCT GTGCCTGGTC ACCGTTTCTA TGTAAATGAT
GCGGGTTCTT TCCCTTATAA TACGGTTGCC GATGGTATAG ATGGTAACGG CCGTTCCATG
GGTATCATGA AATCGCTGGG TGCTATCTTC CGTGATGGAT CACTGGATCC TGATCCGATG
AACTTCAAGA CTTATCGTCT CCTTTCCGGT TACGGTACGA CGATGACGGA GTTCGATACC
GTGAAGGCGA TGATCGATAC GATCCCTGTT CCGGGATTTG CTGCTGTGAG TATTAAGTTC
TCCAACGGTA CATTGTCTGG TAATGAGGGT AATACTGTTG ACGGCGAACA GCCTGCACAG
GGTCTGACCC TGACGGTATC CGGCGGTAAG CTGAACGCGC CTGCTTATGT ACTGGTAAGA
TACGATGCCG CTTACTCCGC TAATTATGCA CATCCTGCCG TTCCGGGTAC TGATTTTACC
CTCTCACAAG AGGCATTCCT GGTACCTGCC GGCGACTATA CAACTCCTAA GACAGTCACC
ATCCCTAACC TGCATGTTGT CGGAAACGAT CAGTTGCAGT ACAGCCGTTC CTTACGTCTG
AAACTCGTAA GTACCTGTAC CTCTCTGTTA AGTATTTCCG GTACTTCAGA AGTGGATTAT
ACCATCGTGG ATGACGAGCC AAGAACGCTC ACCATGAATA TTGATAGTAC TTCGCTGTAT
GAGGGTAACT CTTCCAAAGC GAGAATTACA CTGCCGATCG GTATTACCTG TCCGGAAGAT
ATCGTGATCA GTTTCTCCCG CGTAGCTACT TCTACTGCCG GTGATACTGA TTACGTCGTA
CCGCCGAATA TCGTGATCCC TGCTAATCAG ACAGGTACTG CGATCTTTAA CTTCAGCGCA
AAGTCAGATA AAGTACTGGA AAACACCGAA AACCTGTCCC TGCGATTCCA GGGTACGATC
TTAGGTATTG GTGTGGCCAG CCAGAAAGAT ATTCAGATCA AGGATAGTAC GTTCCTCAAC
CCGAATTATT CACAGATCAT GGCCGATTGT GTATCTCCGG ATGCACCCAG GCCGGTACCT
GAGGGATATA ACGGGTATCT CTCCCTGCAC CTGCCGCCAG GTGTTACTTC GGAGGTAACG
ATCAATATGC TGGATGTGTA TGTGGACTGG GATAATGCAA CGGCAGAAGA CCAGGTGGAT
TTTGACCTGA ACTACTATTC CGGTCTTGAG TTCAAGATCA CACCTGGTAC TACAGAAACA
AGAATTCCTT TCTATGTATT CCCGGATAAA ATAATGGAAG GTCCGGTACC TGAACATTTC
GACCTGCTGA TGCTGGCTAT CGATGATGTG GGTGCTGGTC GTGTATATAA TTATGTAGGA
CCTGCCATCA CGATTAAAGA TGTGGATGCG GACAGCAGTC TGAAACTGAT TGTGACCGCT
ACACCGAATA CGATTGAAGA AGGAGACGCC GGTGCAGCTG TTACCATTGC TTTCCCTGAC
GATATCGTTT CTTTATATGA TGTGCCGGTA ACTATATCAA GAGGTCTCAG TTCAAAAGCA
ACTGACCTCG ATCTGGAAAG TCCGTTACCT ACTAACTTAG TCATTAAAGC AGGTAAGAAT
TCTGTTACTT TTCCTGCTAA TGTGAAAGCG AAAACGGACA ACGTACTGGA ATCAGATGAA
AGTCTGTGGA TTGTTACTAC GCCGAGTGGC TTCACGGTAG ATTCTTCTCT GATTACGATC
CAGGACGTAA CAGGTGAAAT ACCAGGTAAT AAAGACATGA AGATCGAGCT GGTAACACCA
GATCTGAAAG AAGGTAATAC TACCGGTATC AAAATCAGTT TCGTAAACAG CACACTGACT
GCTGAGGAGC CTATCTCCAT CACCTTGTCA CACGATGCTA CTTCCACAGC TGCAACAACA
GATTATTCTA TTCCTGCGAC GATCACATTA CCTGCAGGAC TGAGCACATA TACCGTAGAT
GGTGCATTCG CTGCCACTGC TGATAAAATC CTGGAACTGG ATGAAGCGGT GAAAGTGACA
GGTGTCGCCA CTACTATTCC GGGACTGACC GTTACAGGTT TCAGCGGTAC TGTACTGGAT
GCTACCGGTG ATGATCCTAA TAATAAAAAG ATCACGGTTA CTGCCAGTCA TACAGAAATG
GATGAAGGCG GTTCAGGATA TAGCTTTACT TATAGTCTGC CAGCAGGTTA TACTACTGAA
ATACCAATTA TTATCACACC GGCACTGATG ACAGGTTCAA CTACCATTGC GGACGATTAT
CTGCTGGACA GCACGCAGCT GACCATAGAT AATGGAGGTA ATACGGTATC AACTGGTGTT
ACGATCAATG CAGACCCGGT AGTGGAAGGA GATGAAATTA TGGTAATGGG CGGCACTGCT
GCTACAGCAT TGAGTGGTGT TCAGGTAGTG CCAGCTTCGG TGATCATTAA AGATAAAACA
CAGATGTCTG CTCCGACAGT AACCGTTGAC AGAACGGACC TGGTAGAGGG AGGCGCTGGC
GCTTTCATTA CGGTGACCAT GCCTTTTGGT GCTGTGCCAT CTACACCGCT GACGGTGAAA
ATAACAAGAG GATTGAGTTC TCCGGCTACA TCAGGTTTCA CTGGCGTACC GCAGACTATC
ACATTGAGTG GTAATTCTGT CACTATTCCG GTTCCGGTAG CTGCAAGTTC CGATAACATA
CTGGCCGATG ATGATCAGCT GGTGGTGGTA GTAGAAACAG ACGGTTATCC GGCAGATTCG
ATCACTTTTA ACATCATTGA TGTTACTATC AATGATCCTG CGAATACTAA AATTCACTTC
ACACCAGAAC CAGTAAGTCA GGGTAACCGT GTGAAAGAAG GCAATACATT TACTGTTCGT
GCAAGTTTCC CTCCGGGTGT AACTGCTGCT AAATCATTAT TCGTACAGGT TGCTGCTACA
CCGGCATCTG TTGCTACGGG CGCTGATTAT ACGGGTCTGC CGACGACCTT CACCATGAAT
CCGGGTGTGA ATCATGCTGA TTTCGATATC GTTGCGCTGA CTGATAAAGT GATTGAAAAT
CCTGAGCTGG TAAGATTCAG CGGTGCTGTG ACCTTACTGC CGATGATCGT TGTGGATAGT
TTCGATCTGT ATATAGATGA TGCTACTGCA GCTGATCCTT CTATCGCAGC GCTGAAGATC
ACATTTGATT CCAGCGGTAT ACACAAAGGT TTAGGATATA CAAGAGTGAC GATTGGTTTT
GCTGATCCGC TGGTTACTTC AGAACTGCCG ATTACGATCA ACGTAACACC AGATCCGTCT
TCTACTGCTG ATATCACTAA TTATGTTGGT CTGCCGACGG TAGTAAACTT ACCAAAGGAC
AGCAACAAGG TAACGTTCTT CCTGAGTGTA CCGGATAATC ATGTAGTAGA AGGTAACAAG
ACATTACAGT TTGCTGCAAG TGCAGCAGGT TATACTGTAC TGCCGGTGCC GCCATTACAG
ATCCTGGAGA TCGCAGGTCA GGCGTTGTCA GTAGAAAAAG TAAGTGATGC AGCTGAACCA
GCAAAAGATG GCGCCTTTAT TATTAAGATG CCGGTTGCTT CCACTTCAGA TGTAACTGTA
AGTTTCAGAG TAGATTATAA TGGTACTAAT ATCGAACCAC TTCCATCGGC GGTGATCATA
CCTGCCGGTT CGAAAGAGAT CACCGTACCT GTGCGTATCA AGGACGACCT GATACTGCAG
GGTGACGAGG TATTAAAAGT AACATTGACC AGTGCGGTGG CTGCTAATGG TGGCAACCCG
CTGAACCTGA CAGTTGATAT CGGGCCTGCT GAAATCCTGG TAGTGGATGA TGAAAATGCT
ACTACCGGTC CGAAAGCAGA TGCACGTAAA CTGTTAATCG AACGTATTGC TGATGCGACA
CAACCAGCTA CAGCCGGTGC ATTCAAGATA CGTTTTCAGG ATCCTACTTT GACTGCTTTT
GACAATGTGA AAGTGGTATA CAGTCTTGCG GGTACTGCAA CTTCCGGTAC GGACTATGCT
ATCCTGCCAG GTTATGCGAT CATTCCTAAA GGATCGAGTG AAGTAATGGT GAATGTGAAT
CCGGCAGGTA TTACTTATGC AGGACCAGAT TTAACCGTAC AGGCGACATT GATGGATGCA
TCAGCTGCGC TGCCGAATGT GAACTGGAAC TTTGTAGACA ATCCTGTTGC GACATTGATC
ATCTATAACC ACAATATCGA TACGCCGACT GTGAATCTGT TTGCAGCAAC CAGTCAGCTG
AAAGAAGGCG ACGAAGTAGA ATTCTTTGTA AGACTGAGCC GCGCTATCAC TGTAGACATT
CCGGTTACTG TAGATATCAC AAATGACGTT TATCGTACGC TGACACTTTC AGGTGGTACT
GTGACAGGAA AAGCGGTGAC TGTTGTGGTG CCAAAAGGTT CCAAAGAACA GAGCTTTAAA
GTGAAGGTAA ACGAGAATGA GCTGAATGAT GATGACGGAT GGGTGAAAGC TGCGGTGAGA
GATTTTGATC TTAACAGTGG CAATCCGGCT TACTATACAG GTCTGGCAAG TGAAGTATCG
AATACTGTAA GTGATAATGA TTCTATGAAA CTGACCTTTA CAGAGAGTCA GTATTCCGTG
AAGGTTGCTT TTGATACGAT TGGACAACCA TTACCATTTA CTGTTCGATT CAACCGGGCA
AGTTCCCGTC TTGTAACTGT GTATTACGAA TTCTATACAC CAGCGCCAAC GGAGATTCCG
GCTAATACAT TGCTGGCAGT TGCGCCGAAA GATTACGATC CGACTATCTT CCCGATATTA
TTGTTGCCAG GTCAGACAAT GATCGACATA CCGGTACCGG TGAACAGTGT GGAGAAAGAC
AAGATCTTCG GTATGCGTTT GCTGAGAGCG ACTGTAGCAT CTAATCAGAA CGTACCGGCG
CTTGATTCTA TCATGACAGC GAGCGGTCTG ATTAAGATCT GTATGGATTG TGATGTGGAT
GGCGATGGCG TACCTGATTA TGTAGAGCGT TTCATCACAG ATGGCAGATG GAGAGATGAT
AACAAGGGTG CATTACGAGT ACATCCGGCG ATGTCGCCTA ACAATGACGG ACTGGGTAAC
GAAACGCTGG AGGTTGAGAA CATTGACAAG TATCCTGATA ACGAAGTAAC AATATTCAAC
CGCTGGGGTG GTACTGTATT TACGACGAAG AACTATCATA ATCAACGAAA CAACTTCAAT
GGTAAAGGAA ACGTTGGTGC GACCAAGGGT CAGGATGTTC CGGATGGTTC TTACTTCTTT
ATTATTCATA CGACAGATGC AAGTGGTAAC AAAGAACGTT ACACAGGGTT CATTGTAATA
AAACGATAG
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| Protein sequence | MLKLPDPMRR SIAAALSKAQ NALCRIVLPL FLLLFICSEV NAQTVRAVIN PTGGTPAFND
LKIEILSDGG IKVTRKGLLE SYIRTDSSQG MRAFLDFKNS GYLASANLKS PTVCYISPVS
GTGEYWDPYK VHIVGTIVDR YKNYPTGQTG TVTIIVSYVK NTNYFFMDYV LHMPQVSGFT
KAMLYQSEQV VMGAAAGDDP DAASPCAYGF MNAAGTTVGV YRDASCATTP EAPRSHVYRA
LRKFDSWEVS VPGHRFYVND AGSFPYNTVA DGIDGNGRSM GIMKSLGAIF RDGSLDPDPM
NFKTYRLLSG YGTTMTEFDT VKAMIDTIPV PGFAAVSIKF SNGTLSGNEG NTVDGEQPAQ
GLTLTVSGGK LNAPAYVLVR YDAAYSANYA HPAVPGTDFT LSQEAFLVPA GDYTTPKTVT
IPNLHVVGND QLQYSRSLRL KLVSTCTSLL SISGTSEVDY TIVDDEPRTL TMNIDSTSLY
EGNSSKARIT LPIGITCPED IVISFSRVAT STAGDTDYVV PPNIVIPANQ TGTAIFNFSA
KSDKVLENTE NLSLRFQGTI LGIGVASQKD IQIKDSTFLN PNYSQIMADC VSPDAPRPVP
EGYNGYLSLH LPPGVTSEVT INMLDVYVDW DNATAEDQVD FDLNYYSGLE FKITPGTTET
RIPFYVFPDK IMEGPVPEHF DLLMLAIDDV GAGRVYNYVG PAITIKDVDA DSSLKLIVTA
TPNTIEEGDA GAAVTIAFPD DIVSLYDVPV TISRGLSSKA TDLDLESPLP TNLVIKAGKN
SVTFPANVKA KTDNVLESDE SLWIVTTPSG FTVDSSLITI QDVTGEIPGN KDMKIELVTP
DLKEGNTTGI KISFVNSTLT AEEPISITLS HDATSTAATT DYSIPATITL PAGLSTYTVD
GAFAATADKI LELDEAVKVT GVATTIPGLT VTGFSGTVLD ATGDDPNNKK ITVTASHTEM
DEGGSGYSFT YSLPAGYTTE IPIIITPALM TGSTTIADDY LLDSTQLTID NGGNTVSTGV
TINADPVVEG DEIMVMGGTA ATALSGVQVV PASVIIKDKT QMSAPTVTVD RTDLVEGGAG
AFITVTMPFG AVPSTPLTVK ITRGLSSPAT SGFTGVPQTI TLSGNSVTIP VPVAASSDNI
LADDDQLVVV VETDGYPADS ITFNIIDVTI NDPANTKIHF TPEPVSQGNR VKEGNTFTVR
ASFPPGVTAA KSLFVQVAAT PASVATGADY TGLPTTFTMN PGVNHADFDI VALTDKVIEN
PELVRFSGAV TLLPMIVVDS FDLYIDDATA ADPSIAALKI TFDSSGIHKG LGYTRVTIGF
ADPLVTSELP ITINVTPDPS STADITNYVG LPTVVNLPKD SNKVTFFLSV PDNHVVEGNK
TLQFAASAAG YTVLPVPPLQ ILEIAGQALS VEKVSDAAEP AKDGAFIIKM PVASTSDVTV
SFRVDYNGTN IEPLPSAVII PAGSKEITVP VRIKDDLILQ GDEVLKVTLT SAVAANGGNP
LNLTVDIGPA EILVVDDENA TTGPKADARK LLIERIADAT QPATAGAFKI RFQDPTLTAF
DNVKVVYSLA GTATSGTDYA ILPGYAIIPK GSSEVMVNVN PAGITYAGPD LTVQATLMDA
SAALPNVNWN FVDNPVATLI IYNHNIDTPT VNLFAATSQL KEGDEVEFFV RLSRAITVDI
PVTVDITNDV YRTLTLSGGT VTGKAVTVVV PKGSKEQSFK VKVNENELND DDGWVKAAVR
DFDLNSGNPA YYTGLASEVS NTVSDNDSMK LTFTESQYSV KVAFDTIGQP LPFTVRFNRA
SSRLVTVYYE FYTPAPTEIP ANTLLAVAPK DYDPTIFPIL LLPGQTMIDI PVPVNSVEKD
KIFGMRLLRA TVASNQNVPA LDSIMTASGL IKICMDCDVD GDGVPDYVER FITDGRWRDD
NKGALRVHPA MSPNNDGLGN ETLEVENIDK YPDNEVTIFN RWGGTVFTTK NYHNQRNNFN
GKGNVGATKG QDVPDGSYFF IIHTTDASGN KERYTGFIVI KR
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