| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2036 |
|---|
| Symbol | |
|---|
| ID | 8358187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2477788 |
|---|
| End bp | 2480190 |
|---|
| Gene Length | 2403 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964223 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_003121732 |
|---|
| Protein GI | 256421079 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.326048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.210205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TCTATTTTGC AAACTCGGAA GAAGAGATGG AGTTCATGCC GATTATCCCT
CTGAACGAGG AGACTGATGG GCTGGAAGAT GATAAAATAC CTGATGAACT GGCGTTATTG
CCACTTAGAA ATACAGTACT TTTTCCTGGC GTAGTGCTGC CAATCACAGT TGGCAGAGAC
AAATCCATAA AGGCAGTGAA TGATGCCTAT AAGGCAGATA AGCTGATCGG TGTGGTTGCA
CAAAAGGATA GTACCGTTGA GGATCCCAAC CTTGTAGATC TTTCCAATGT AGGCACTGTA
GCCCGCATTG TTAAACTGAT AAAAATGCCG GATGGTGGCA CAACCATCAT TATTCAGGGT
CGTAAACGTT TCAAAATCAG TGAAGTAGTT TCGGAAGATC CTTATTTCAA AGCCCGTATC
GAATTGTTGC AGGATGAAAT AGTGACAGAC GATCCGGAAT TTGACGCTTA TATCTCCTCC
ATCAAAGACC TGGCAGGTCA GATCATTCAG TTATCACCTA ATCTGCCATC TGAAGCCAGC
ATCATCCTGA AGAACATTGA AAATGAGTCT TTCCTGGTGC ACTTTGTATC CTCCAACCTG
AACTGTGATC TGAAAGATAA ACAGCAGCTG CTGGAAATCA ATAACCTGCG CACCCGTGCA
GAGTTATTAC TGAAGCTGTT ACAGGTGGAA CTGCAATTGG CGGAGCTGAA AAACAAGATT
ACCAATAAAA CCAAGGCAGA TCTCGATAAA CAACAACGTG AATATTTCCT GCAGCAGCAG
CTGAAATCCA TCAAGGAAGA ACTGGGGGGC GATTCTAACG ACCGTGAGGT AAAGGAATTG
CAGCGTAAGG CAGAAACGAA ACAATGGACG GAAGCAGCCG CAGAATTATT CCGCAAGGGT
ATTGAGAAGC TGGAGCGTAT GCATCCCAGC ACACCGGATT ACTCCGTGGT GTACAATCAC
CTGGATCTGA TGCTGGACCT GCCATGGAAG CATTATACAG AAGACAGTTA CGACCTGAAA
AAGGCGAAAA AGATACTGGA CAACGACCAC TATGGTATGG ACAAGATCAA GGAGCGTATC
CTGGAATACC TGGCCGTACT GAAACTGAAA GGTGACATGA AGTCGCCGAT CCTGTGTTTT
GTGGGTCCTC CGGGTATTGG TAAAACCTCC CTGGGTCGTT CTATAGCCAG TGCGATCGGC
CGTAAGTATG TAAGACTCAG CCTTGGCGGT CTGCATGACG AAAGTGAGAT CAGAGGTCAC
CGTAAGACGT ACATCGGCGC TATGCCGGGT CGTCTTTTAC AGTCCATCCG TAAGGTGAAA
ACATCCAATC CGGTAATGAT CCTGGATGAG ATTGATAAGA TAGGTAACGA CCATCGTGGC
GATCCAAGTT CTGCGATGCT GGAAGTACTG GATCCTGAAC AGAACGGCAC TTTTTATGAC
AACTACCTGG AGCTGGAATA TGACCTGAGC AAGGTGTTGT TTATTGCTAC TGCGAATAAT
ATCAATGCGA TCAGTCCCGC TTTACGCGAC AGGCTGGAAA TCATTGACCT GAGTGGTTAT
TCCATTGAAG AAAAGGTGGA AATCGCGAAG CGTCACCTGG TGCCAAAACA GAAAGAGGCA
CACGGTTTGA AATCCCTTAA AATGCGTATC AGCAATGGTA TACTGGAAAG GATCGTACAG
GATTACACCC GTGAAAGCGG TGTACGTGAA CTGGACAGAC AGCTGGCTTC TATCATGCGT
GCAATTGCCA AGGATGTGGC GCTGGAGGAA GAAATTCCGG ATAGTTTGAC GGAAGAGCAT
GTGGAGCGTA TCCTGGGTAA AGGCCGTTAT TCTAATGAGA TCTATAAAGT GGGTAATCCT
CCCGGCGTAG CCGTAGGATT GGCCTGGACA TATGTAGGGG GAGATATCCT GTTTATCGAG
ACCAGTCTGA GTGAAGGAAA AGGAGAGCTG AAACTGACCG GTAACCTGGG TAATGTGATG
AAGGAGTCAG TAAGTACGGC CTTGAGCTAT CTGCAGGCAC ATGCAGCGGA GTTCAAAATC
GATCCGAAGT TATTCGGACA GCGTACTATT CACGTACATG TGCCGGAAGG CGCGGTACCG
AAGGATGGTC CGAGTGCGGG TATTACCATG CTGACGGCAT TGACGTCTGC TTTTACCGGC
AGAAAGGTGA AGTCTTACCT GGCGATGACG GGCGAGATCA CCCTGCGCGG ACAGGTACTG
CCGGTGGGAG GTATCAAGGA AAAGATCCTG GCTGCCAAAA GGGCGGGTAT TAAGGAAATC
ATCCTGTGCT GGCAGAATGA AAAGGATATT AAGGAGATCA ATCCCGACTA TATCAAGGGC
CTGAAATTTC ATTTTGTAAA AGAAATGAAC CAAGTGGTAG ATATAGCGTT ATTAAAGAAG
TAA
|
|---|
| Protein sequence | MNKFYFANSE EEMEFMPIIP LNEETDGLED DKIPDELALL PLRNTVLFPG VVLPITVGRD
KSIKAVNDAY KADKLIGVVA QKDSTVEDPN LVDLSNVGTV ARIVKLIKMP DGGTTIIIQG
RKRFKISEVV SEDPYFKARI ELLQDEIVTD DPEFDAYISS IKDLAGQIIQ LSPNLPSEAS
IILKNIENES FLVHFVSSNL NCDLKDKQQL LEINNLRTRA ELLLKLLQVE LQLAELKNKI
TNKTKADLDK QQREYFLQQQ LKSIKEELGG DSNDREVKEL QRKAETKQWT EAAAELFRKG
IEKLERMHPS TPDYSVVYNH LDLMLDLPWK HYTEDSYDLK KAKKILDNDH YGMDKIKERI
LEYLAVLKLK GDMKSPILCF VGPPGIGKTS LGRSIASAIG RKYVRLSLGG LHDESEIRGH
RKTYIGAMPG RLLQSIRKVK TSNPVMILDE IDKIGNDHRG DPSSAMLEVL DPEQNGTFYD
NYLELEYDLS KVLFIATANN INAISPALRD RLEIIDLSGY SIEEKVEIAK RHLVPKQKEA
HGLKSLKMRI SNGILERIVQ DYTRESGVRE LDRQLASIMR AIAKDVALEE EIPDSLTEEH
VERILGKGRY SNEIYKVGNP PGVAVGLAWT YVGGDILFIE TSLSEGKGEL KLTGNLGNVM
KESVSTALSY LQAHAAEFKI DPKLFGQRTI HVHVPEGAVP KDGPSAGITM LTALTSAFTG
RKVKSYLAMT GEITLRGQVL PVGGIKEKIL AAKRAGIKEI ILCWQNEKDI KEINPDYIKG
LKFHFVKEMN QVVDIALLKK
|
|---|
| |