| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2032 |
|---|
| Symbol | |
|---|
| ID | 8358183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2473486 |
|---|
| End bp | 2474166 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964219 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003121728 |
|---|
| Protein GI | 256421075 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.60548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA CCTATTACGG CCATTCGAGT TTCGGGATAG AGATTAAAGG AAAGAAGATT
GTTTTTGACC CGTTCATTAC ACACAACGAG TTGGCAAAAA CAGTGGATAT CAACAAGATA
GAAGCAGATT ATATCTTTTG CTCCCACGGG CATGACGATC ATGTGGCGGA CCTGGTAGTA
CTGGCAAAAC GTACCAATGC AACGATTGTC GGAGCATATG AACTGACAAG CTGGGCGGGC
AGACAAGGTC TTGAGCGGGT ACATCCGATG AACACCGGGG GGAAATGGCA GTTTGACTTT
GGAACCGTGA AATGTGTGGT TGCCCATCAC TCCAGCGGTA TGCCGGATGG ATCCTACGGA
GGTAATCCGA TGGGATTCGT ATTTACAACT GACGAAGGAA ATTTTTATTT TGCAGGAGAT
ACAGCGCTGA CTTTAGATAT GCAACTCATA CCAAAGTTTG CTAAACTGGA TTTTGCAGTT
TTACCAATAG GCGATAATTT CACAATGGGA GCTGACGATG CAATTGTGGC GGCAGGGTTT
GTTGAGTGCA AGCGTATAAT CGGGGTTCAT TATGACACCT TTGGATATAT CAAGATAGAT
AAGGAGAAGA CGCAGCAGCA ATTTGCGGCC GCAGGCCTGG AATTGTTACT GCCGGCAATA
GGAAGTAGCA TTGATCTTTA G
|
|---|
| Protein sequence | MKFTYYGHSS FGIEIKGKKI VFDPFITHNE LAKTVDINKI EADYIFCSHG HDDHVADLVV
LAKRTNATIV GAYELTSWAG RQGLERVHPM NTGGKWQFDF GTVKCVVAHH SSGMPDGSYG
GNPMGFVFTT DEGNFYFAGD TALTLDMQLI PKFAKLDFAV LPIGDNFTMG ADDAIVAAGF
VECKRIIGVH YDTFGYIKID KEKTQQQFAA AGLELLLPAI GSSIDL
|
|---|
| |