Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2028 |
Symbol | |
ID | 8358179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2470210 |
End bp | 2470926 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644964215 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_003121724 |
Protein GI | 256421071 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.279033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CGCTTATCGG TTACGGAAAA ATGGGAAAGG CAATTGAGGC AATCGCCGTT GCCAAAGGAC ACGAAATTGT TCATCGTATT GACCTGAGTA ATCTGCACCT GCTTGAGAAA GAAGAACTCA GCAAGGCTGA TGTGGCCATC GAATTCACCG GTCCGGAAAC TGCCTATAGC AATATCCTGA AATGTTTTGC CGCCAATGTA CCTGTCGTTT GCGGCAGCAC AGGCTGGCTG GAACATCTCG GCACAGTGAA ATCCGCCTGT CTGGAACAAC ACCAGGCATT CCTCTACGCC AGCAATTTCA GCGTAGGTGT GAATATCTTC TTCGAAATCA ATAAACGCCT CGCAGAACTG ATGGCTAACC AGCCCCAGTA CGGTGTGAAA ATGGAAGAAA TCCACCACAC ACAGAAAAGA GATGCACCAA GCGGTACCGC TATCACCCTG GCAGAACAGG TAATGGATAA GGTACAGCGT AAAAAAGAAT GGGTAAATAC CGAAGAGGCA CAGCCTGAAC AACTGTCTAT CGTCTCCAAA CGTATTGACC CGGCTCCTGG TACACACAGC ATCACCTATA CGTCCAGCAT AGACGACATC AGCATCACAC ATACAGCTCA TTCCCGCGAG GGTTTTGCTT CAGGTGCCGT CGTGGCTGCA GAATGGATAC TGGGAAAACA TGGTGTATTC GGTATGAAAG ACGTACTGAG CCTGTAA
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Protein sequence | MKIALIGYGK MGKAIEAIAV AKGHEIVHRI DLSNLHLLEK EELSKADVAI EFTGPETAYS NILKCFAANV PVVCGSTGWL EHLGTVKSAC LEQHQAFLYA SNFSVGVNIF FEINKRLAEL MANQPQYGVK MEEIHHTQKR DAPSGTAITL AEQVMDKVQR KKEWVNTEEA QPEQLSIVSK RIDPAPGTHS ITYTSSIDDI SITHTAHSRE GFASGAVVAA EWILGKHGVF GMKDVLSL
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