| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2027 |
|---|
| Symbol | |
|---|
| ID | 8358178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2469724 |
|---|
| End bp | 2470152 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964214 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_003121723 |
|---|
| Protein GI | 256421070 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.270145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCTA AAAAAACGCA GTACGCTTTT CACGCGCTCA TACACCTGGC AGAGAATGCA
GATAAAGGAC CCATTCTGAT ATCTGAAATA GCACAGGAAA AGAGCATTTC CATCAAATTC
CTGGAGAATA TCCTGCTGGA GCTGAAAAAT GCCGGAATTC TCGGTAGTAA AAAAGGTAAA
GGCGGTGGCT ATTACCTGCT GAAAACACCG AAGGAAATTC CTCTTGCGAA GATCATCCGC
CTGCTGGATG GCGCTATTGC GCTACTCCCC TGCGTAAGTC TCAACTATTA TGAAAAATGT
GAGAATTGCC GGGATGAAGC AGTGTGCGGC CTGAACGACG TAATGGGGAA GGTGAGAGAT
GCGACGCTAA AAATCCTTGA GACCAAAACA CTGAAGGACA TATTGACAAG AAATGTGTCC
ATATTATAA
|
|---|
| Protein sequence | MLSKKTQYAF HALIHLAENA DKGPILISEI AQEKSISIKF LENILLELKN AGILGSKKGK
GGGYYLLKTP KEIPLAKIIR LLDGAIALLP CVSLNYYEKC ENCRDEAVCG LNDVMGKVRD
ATLKILETKT LKDILTRNVS IL
|
|---|
| |