Gene Cpin_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2026 
Symbol 
ID8358177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2468625 
End bp2469308 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content50% 
IMG OID644964213 
Productadenylylsulfate reductase, thioredoxin dependent 
Protein accessionYP_003121722 
Protein GI256421069 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.263515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATA TCAGTACAGC ACTGGAAGGG CTAGATCCAA TTGCTGCCAT GCAGTATCTG 
GCAGCAGCAT TTCCCGGAGC GGTGGCCTTT TCCACCTCAT TTGGACAGGA AGATCAGGTG
ATTGCAGACA TGATTTGGCG TGCTAACCTG CCTGTCAGAA TCTTCACACT GGACACAGGC
CGTTTGTTTC AGGAAACCTA TGACCTGATG GACCTCACCC GCGCCCGCTA CAAAAAGACA
TTTGAAGTTT ATTTCCCGGA AACTGCTTCA GTAGAGAAAT TACTACAGGA AAAAGGTCCG
AACAGCTTCT ACGAATCTGT TGAAAACCGC AAAGAATGCT GTAATATCCG TAAAGTAGTA
CCGCTGAACC GTGCCCTCCA AGGTGTAAAA GTCTGGATCA CCGGCCTGCG TGCAGAACAG
TCTGAAAACC GCCAGACGCT ACACGCCCTG GAATGGGACG AACAACGCCA GCTGTACAAA
TACAATCCAC TGATCAACTG GAGCTACGAC GAAATGATCA ATTACCTGCA GACGCAAAAT
GTTCCTTATA ACAAATTGCA CGATAAAGGC TTCATTTCTA TCGGGTGCGC CCCCTGTACC
CGTGCCATCG AACCGGGCGA ACATCCCCGC GCCGGCAGAT GGTGGTGGGA ACTGTCAAAA
AAAGAATGCG GCTTACATGG CTGA
 
Protein sequence
MENISTALEG LDPIAAMQYL AAAFPGAVAF STSFGQEDQV IADMIWRANL PVRIFTLDTG 
RLFQETYDLM DLTRARYKKT FEVYFPETAS VEKLLQEKGP NSFYESVENR KECCNIRKVV
PLNRALQGVK VWITGLRAEQ SENRQTLHAL EWDEQRQLYK YNPLINWSYD EMINYLQTQN
VPYNKLHDKG FISIGCAPCT RAIEPGEHPR AGRWWWELSK KECGLHG