Gene Cpin_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2025 
Symbol 
ID8358176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2467642 
End bp2468550 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID644964212 
Productsulfate adenylyltransferase subunit 2 
Protein accessionYP_003121721 
Protein GI256421068 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR02039] sulfate adenylyltransferase, small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.289912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA AAATACAGTG GGAGTTTCCG CAGGCACTGG AAGACGAAGC CATCTATATT 
TTACGTGAAA CAGCTGCACA GTTCGAACGC CCTGCTATCC TGTTCTCAGG TGGTAAGGAC
TCTATCACCA TCGTGCGCCT GGCACAAAAG GCATTTTATC CCGGTAAAGT TCCTTTTCCA
TTATTACACG TAGATACCGG CCACAACTTC CCCGAAACTA TTCAGTTCCG CGACTGGCTG
GTGGAATCAC TGGGTCTTGA TCTTAGAGTA AGATATGTGC AGGATAGCAT CAACCAGGGT
AAAGTACAGG AAGAAACTGG TAAATACGCC AGCAGAAACG CCCTCCAGAC AGTCACCCTG
CTCGACGCTA TCGAAGAACT GAAATTCGAT GCCTGCATCG GCGGTGCCCG TCGTGATGAA
GAAAAGGCAC GTGCGAAAGA AAGAATATTC TCCGTAAGAG ACGAATTCGG TCAGTGGAAC
GCTAAAATGC AACGCCCTGA ACTGTTTGAT ATGCTCAACG GTAAAATACA GATGGGTGAA
AACGTACGCG TATTCCCTAT CTCCAACTGG ACAGAACTCG ATGTATGGAA CTACATCCGC
AGAGAAAAAC TGGAAATCCC ATCCATCTAC TTCTCTCATG AAAGAGATAT CATCGAAAGA
GATGGTATGT ACTGGCCACA CTCCCCATTC CTCAATACCA CAGAAGAAGA AACGCCTTTC
CGCCAGAAAG TACGCTTCCG CACAGTAGGC GATATGACCT GTACCGCCGC TGTTATTTCT
GAGGCAGATA AACTGGAAGA TATCATCTCC GAAATACTAG AAGCCAAGAT ATCTGAAAGA
GGCGCCCGTA TTGACGACAA ACGCTCTGAA GCAGCAATGG AAAAGAGAAA ACAGGCAGGC
TACTTCTAG
 
Protein sequence
MTNKIQWEFP QALEDEAIYI LRETAAQFER PAILFSGGKD SITIVRLAQK AFYPGKVPFP 
LLHVDTGHNF PETIQFRDWL VESLGLDLRV RYVQDSINQG KVQEETGKYA SRNALQTVTL
LDAIEELKFD ACIGGARRDE EKARAKERIF SVRDEFGQWN AKMQRPELFD MLNGKIQMGE
NVRVFPISNW TELDVWNYIR REKLEIPSIY FSHERDIIER DGMYWPHSPF LNTTEEETPF
RQKVRFRTVG DMTCTAAVIS EADKLEDIIS EILEAKISER GARIDDKRSE AAMEKRKQAG
YF