Gene Cpin_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2024 
Symbol 
ID8358175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2466310 
End bp2467557 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content48% 
IMG OID644964211 
Productsulfate adenylyltransferase, large subunit 
Protein accessionYP_003121720 
Protein GI256421067 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2895] GTPases - Sulfate adenylate transferase subunit 1 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02034] sulfate adenylyltransferase, large subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.216556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTTT TACGTATAAC CACTTCCGGC AGTGTAGATG ATGGTAAAAG CACCCTGATA 
GGCAGGCTGC TCTATGATAC TCATTCTATC CCACAGGATA AAATGGAAGC TTTACATGCT
GCCAGCAAAC GCAAAGGACT TGATTTTACC GACCTGTCGT TGCTGACAGA CGGCCTCGTG
GCTGAACGTG AACAAGGTAT CACCATCGAC GTGGCGCATA TCTACTTCTC CACTCCTACC
CGCAAATACA TTATCGCCGA TACACCAGGT CACATCGAGT ATACCCGTAA CATGGTCACC
GGTGCTTCCA ACGCACAGGT ATCCCTGATA CTGATCGATG CGCGTAAAGG GATCGTCGAA
CAAACTTACC GCCACTTCTT CATCGCCTGC CTGCTGCGTA TTCCATACCT GGTAGTATGC
GTGAATAAAA TGGACCTGGT AGAATACAGC GAAGCACGCT TTAATCAGAT CGTGGAAGAC
TTCCAGCAAC TGATCGCTAA AGCGCCGTTC AAAGCGCCTT CTATCAAATA CATCCCGATC
TCTTCTATCT ACGGAGAGAA CCTGGCTACC CGCTCAGAAA AGATCAGCTG GTACTCCGAA
GAGTCCCTGC TTGAATACCT GGAACAGATC ACTTTCGACC ATGCTGACAG CAGTCACCCT
GCACGTTTCA AAGTACAGTC AGTGATCCGT CCGAAAACAG ACGCCTATCA CGACTTCCGC
GGTTTCGCCG GAAAAGTGGT AAGCGGACAT TTCAATGTCG GTGATGAAAT CATCTCCCTG
CCTTCTCAGC AGAAAAGCCG TATCAAAACC ATCGAACAGT TCGAAACACA ACTCACTACA
GCGGAAGCCC GCCAGAGCGT CGTTATCACA CTGGAAGATG AAATTGATAC CAGTCGTGGC
AGTATGCTGT CCAAACCAGA AAATGCACCT TCCCTGCTGA AAGAAATTGA CGCACAGGTA
TGCTGGATGG ATCAGACCAA ACTGGTGCCT GGTAAAGCCT ATCTGCTGCA ACATGGTGTA
AACCGCGTAA AAGCGAAAGT ACAGCAGATC CGGCATGTGA TCGACGTTAC CTCCAATACC
ATCCTGGAAG ATAAAAAGGA AATGGGATTG AATGATATCG GTAAGATTAC ACTGAAAACT
GCACATCCGA TATTTGCAGA CAGCTATGAC GCTAATCCTG CAAATGGTGC ATTCATCCTG
ATCGATGAAA TGAGCAATTC AACAGTGGCT GTCGGATTCG TAGCATAA
 
Protein sequence
MEVLRITTSG SVDDGKSTLI GRLLYDTHSI PQDKMEALHA ASKRKGLDFT DLSLLTDGLV 
AEREQGITID VAHIYFSTPT RKYIIADTPG HIEYTRNMVT GASNAQVSLI LIDARKGIVE
QTYRHFFIAC LLRIPYLVVC VNKMDLVEYS EARFNQIVED FQQLIAKAPF KAPSIKYIPI
SSIYGENLAT RSEKISWYSE ESLLEYLEQI TFDHADSSHP ARFKVQSVIR PKTDAYHDFR
GFAGKVVSGH FNVGDEIISL PSQQKSRIKT IEQFETQLTT AEARQSVVIT LEDEIDTSRG
SMLSKPENAP SLLKEIDAQV CWMDQTKLVP GKAYLLQHGV NRVKAKVQQI RHVIDVTSNT
ILEDKKEMGL NDIGKITLKT AHPIFADSYD ANPANGAFIL IDEMSNSTVA VGFVA