Gene Cpin_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2005 
Symbol 
ID8358156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2444363 
End bp2444848 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content52% 
IMG OID644964192 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003121701 
Protein GI256421048 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0932535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.109894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT ACGCTTCACT GGGATACCTG GTTTTTGGCA GCCGCCTCAG ACGGCTGAGT 
GAATACTTCC TCATGGAGGT AAATAAGGTC TATGAACAAG CTGGTATTGC CTTTGACGCC
AGCTGGTTCC CGGTTTTCTA TATCCTTTCC CGTCAGCAGA ACATCCCGCT GATCGACATT
GCCGAACAGC TGGAAGTCTC TCACTCGGCC ATCAGTCAGC TGATCACCAA CCTGAAAAAG
AAGGGATTAG TGCATACCGC TCCTTGTCCC GATGACGGAC GCCGGCAGCT GGTCATGCTC
ACACCGCAGG GAGAGGAGCT GCTACAGCAG GTACAGCCCA TATGGGAAGC CATTACTACG
GCTATGGAGG AACTGACGGA AGAGAACAAA CAAAGTAAAC AGCTGCTGGA AGCCATCAGA
CAGGTGGAAA GCGCCGTACA GGGAACGTCC CTGTCCGCAA GGATACAGGC GTCTATGAAA
AACTGA
 
Protein sequence
MSFYASLGYL VFGSRLRRLS EYFLMEVNKV YEQAGIAFDA SWFPVFYILS RQQNIPLIDI 
AEQLEVSHSA ISQLITNLKK KGLVHTAPCP DDGRRQLVML TPQGEELLQQ VQPIWEAITT
AMEELTEENK QSKQLLEAIR QVESAVQGTS LSARIQASMK N