Gene Cpin_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2001 
Symbol 
ID8358152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2440757 
End bp2441281 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID644964188 
Producthypothetical protein 
Protein accessionYP_003121697 
Protein GI256421044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.149993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATG TAATAATACT ATTACTAAGC TGCCTGGCAT GTGAACAGGC GCCACCTGAA 
AAACAAGCGA TCCCGGTTGC GGAAGACAGC ACCTTTCTTA CCGGCACTTT CTACCTGGTG
CGTCATGCTG AACAGGCCGG AGTGGATTCT GTACTTGAGG CAACCGGTCA TCAGCAGGCG
GGTGCGCTTT ACCGCTTATT ACAGGACTCA GGTATTCAGA AGATCTACTT TACCCGATAT
CCCGGCAGTC TGGACATGGC AGATTCTATG TACCAATATC TCAGTCTTGA TACAGTTTCT
TATGTAGCTG ATTCTTCCGG AGAGGGATTG TTGTATGAGA TCACCCGTCA GAAGGATTGG
GGAAAGAAGC TGCTGGTGGT GGGGAATAAC CGCGCGCTGG TACCGATTAT GCATTCGCTG
AAGGCAAAGC CCAAGATTGA TTCTGTTGCG GGAAAAGACT ACAGCAGCCT GTTTATCGTC
AGAAAGTATA AGGATAGTGT ACGTTGCAAA AGACTAAACT ATTGA
 
Protein sequence
MRYVIILLLS CLACEQAPPE KQAIPVAEDS TFLTGTFYLV RHAEQAGVDS VLEATGHQQA 
GALYRLLQDS GIQKIYFTRY PGSLDMADSM YQYLSLDTVS YVADSSGEGL LYEITRQKDW
GKKLLVVGNN RALVPIMHSL KAKPKIDSVA GKDYSSLFIV RKYKDSVRCK RLNY