Gene Cpin_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1996 
Symbol 
ID8358147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2434015 
End bp2434593 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID644964183 
ProductO-methyltransferase family 3 
Protein accessionYP_003121692 
Protein GI256421039 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.425029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG ACATACTCCA GCAATACCCT GACCACTATC AGTACATTGT TGACGCAACG 
AACGCATCCG GATTTACGAT GGCCTCTGAC CCACTGACAT GCTCCCTGCT CCGCAGCCTG
GCGGCGGCTA AACCTTATGG CAGCTTTCTC GAATTAGGTA CAGGTACCGG ACTCTCTACC
TCATGGATTC TGGATGGTAT GGATAAAGAA AGTACACTGA TATCAGTTGA TAATGCACAG
GAATACCTGG ATATCGCCAT CCGTTTCCTG AACGATGACA GCAGAATAAA ACTCGTCAAT
GCTGACGGAG GCGAATGGTT AAAAGAAAAC AGACGCCGCA AATTTGATTT CATTTTTGCT
GATACCTGGC ACGGAAAATA CCTGATGCTG GATGAAACAC TGGCCATGCT GAACAAAGGC
GGACTTTATA TCATTGACGA TATGCTGCCG CAATCCAACT GGCCGGAAGG ACACCAGGAA
AAAGCCACCC AGCTGATAAA AGACCTGGAA GCAAGGGAAG ACCTGGTACT GACAAAACAG
GTATGGGCGT CGGGAATTAT CATTGGTGTT AAGAAATAA
 
Protein sequence
MTQDILQQYP DHYQYIVDAT NASGFTMASD PLTCSLLRSL AAAKPYGSFL ELGTGTGLST 
SWILDGMDKE STLISVDNAQ EYLDIAIRFL NDDSRIKLVN ADGGEWLKEN RRRKFDFIFA
DTWHGKYLML DETLAMLNKG GLYIIDDMLP QSNWPEGHQE KATQLIKDLE AREDLVLTKQ
VWASGIIIGV KK