Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1994 |
Symbol | |
ID | 8358145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2432519 |
End bp | 2433817 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964182 |
Product | L-fucose transporter |
Protein accession | YP_003121691 |
Protein GI | 256421038 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.486095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAG CCGCAATGCC CACTTCCACA GTTAAGGCAA ACATCGATAC AAAGAAGAGT TACCTGTTCC CGTTTATACT GGTGACGAGT TTATTTTTTC TATGGGCGCT GATCCACAAT ATGAGCCCTA TCCTTATTCC ACACCTGAAG AAGGCTTGTC AGCTGACAGA CATGCAATCT GCATTTATTG ATTCTGCTGT CTTCGCGGCC TACTTCCTGA TGGCATTGCC GGCAGGTGCG GTTATGAAAA GGTTCGGATA TAAGGCGGGT ATTATTCTGG GCCTCTGCCT GTACGCATTG GGTGCATTTC TTTTTCTTCC GGCCGCCAGC ACCCGTGATT ACAGCTTCTT CCTGGGCGCT TTGTTTATTA TCGCTACCGG TCTTACTTTC CTTGAAACGG CTGCAAATCC TTATGTGTCA GTATTGGGTA GTCCTGAGAC AGCTACTACC CGTCTGAACC TCGCCCAATC CTTTAATGGT GTGGGTGCGA TGATAGCACC GATATTAGGC GCAAAATTTA TTCTTTCCGG TACGGAACTT TCTAAAGAAC AACTGGCTGC CATGTCTCCG GACGTCTTAC AGCAATATCT TGTAGGAGAA GCGAGTACCG TAAAGATTCC CTACCTCGTG ATCGGCATAG TGGTATTAAT GATCGCGGCA CTTTTTGTTG TGACAAAAAT GCCGGAAGTA GTTGAGCCGG AAGATGAAAA GTTTGATGAA ACAGCAGGTA CAAAAGGTAG CATCTTCAGA CACAGACACC TGATTGCTGC GGTCGTGACA ATGTTCTTTT ATATCGGCGG ACAAGTCGGT GTAAATGCTT TCTTTATCCG TTTTGCGAAG TATACTGCGG GTATTGGTGA AAAAGAAGCT GCCGTGTTGC TGGGTTCTGT AGCAGGACTT GGCTTTATGA TTGGTCGTTT CTTTGGTACT TTCCTGATGC GTACGATCAA GCCGCAAACA TTACTTTCAC TCTATGGTGT GGTGAATGTG GCGCTGATCC TGATCGCTAT GATGACCAAA GGACAGATCG CTGTCTGGAC TGTGCTGGCG GTACCGTTCT TCATGTCTAT CATGTTCCCA ACTATATTCT CATTGGGTAT CAAGGGCCTG GGAGGTGATA CGAAATTCGG TTCTTCACTG ATCATTATGT CTATCGTAGG TGGCGCTATT TTCCCGCCAC TGATGGGATT GATCTCTGAT AATTCCAATA TCCAGATGGC CTATATTCTG CCATTGATCT GTTTTGCAGT GGTGGTATGG TTTGGTACAA AAGGGTACAA ACTCGATAAA GCACACTAG
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Protein sequence | MAGAAMPTST VKANIDTKKS YLFPFILVTS LFFLWALIHN MSPILIPHLK KACQLTDMQS AFIDSAVFAA YFLMALPAGA VMKRFGYKAG IILGLCLYAL GAFLFLPAAS TRDYSFFLGA LFIIATGLTF LETAANPYVS VLGSPETATT RLNLAQSFNG VGAMIAPILG AKFILSGTEL SKEQLAAMSP DVLQQYLVGE ASTVKIPYLV IGIVVLMIAA LFVVTKMPEV VEPEDEKFDE TAGTKGSIFR HRHLIAAVVT MFFYIGGQVG VNAFFIRFAK YTAGIGEKEA AVLLGSVAGL GFMIGRFFGT FLMRTIKPQT LLSLYGVVNV ALILIAMMTK GQIAVWTVLA VPFFMSIMFP TIFSLGIKGL GGDTKFGSSL IIMSIVGGAI FPPLMGLISD NSNIQMAYIL PLICFAVVVW FGTKGYKLDK AH
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