Gene Cpin_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1992 
Symbol 
ID8358143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2430836 
End bp2431663 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content48% 
IMG OID644964180 
Productamidohydrolase 2 
Protein accessionYP_003121689 
Protein GI256421036 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.776657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAG ACGCACACCA GCATTTCTGG CAATATCACC CTGTAAAGGA TGCCTGGATC 
ACAGACGATA TGAAAGTGAT TCAGGAAGAT TTCCTGCCGC AGCACCTTTT ACCTGTATTA
CAGGAGAATG GTGTGGATGG CTGTGTTGCT GTACAGGCAG ACCAGTCAGA AACTGAAACC
GGCTTTCTGC TGGCACTTGC AGATCAACAC GCTTTTATCA GAGGAGTAGT AGGATGGGTG
GACCTTCGGG CGGAAAATCT TTCCGACAGA CTGGCCCATT ACCGCCAGTA TGAAAAACTG
AAAGGATTCC GTCATATTGT GCAGGGAGAA CCTGATCCTT CCTTTATTCT CAGGGAGGAT
TTCTGTAAGG GAATAAGGGC GCTGGCTGCA CATGATTTCA CATACGACAT ACTGGTGTAT
CCTGTGCAAT TGCCTGCAGT TGCAACGTTT GTACAACAGT TCCCTGATCA GCGGCTGGTC
ATAGATCATA TGGCAAAGCC TTACTTCAAA ACAGGTGATA TCAGTGCCTG GGAAACACAT
ATGCGGGCAA TCGCGCAGCA ACCTAATGTT TACTGTAAAC TCAGTGGACT GGTAACAGAA
GCGGACTGGC AGAAATGGGA ACTTTCTCAT TTTGCTCCTT TCCTGGATGT TGCGCTCGAT
GCTTTTGGCG CTGAACGACT GATGTTTGGT TCCGACTGGC CGGTATGTAA GCTGGCTGCC
AGCTATACAG AAGTGAAAGC AATTATTACC GATTATATCA GCCGTCTTTC CGATGCGGAA
AGAGCGGGCA TTATGGGCGG AAATGCGGTG AGGTTCTACG GACTGTAG
 
Protein sequence
MIIDAHQHFW QYHPVKDAWI TDDMKVIQED FLPQHLLPVL QENGVDGCVA VQADQSETET 
GFLLALADQH AFIRGVVGWV DLRAENLSDR LAHYRQYEKL KGFRHIVQGE PDPSFILRED
FCKGIRALAA HDFTYDILVY PVQLPAVATF VQQFPDQRLV IDHMAKPYFK TGDISAWETH
MRAIAQQPNV YCKLSGLVTE ADWQKWELSH FAPFLDVALD AFGAERLMFG SDWPVCKLAA
SYTEVKAIIT DYISRLSDAE RAGIMGGNAV RFYGL