Gene Cpin_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1991 
Symbol 
ID8358142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2430434 
End bp2430766 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content46% 
IMG OID644964179 
Productprotein of unknown function DUF718 
Protein accessionYP_003121688 
Protein GI256421035 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.893292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT ATTGCCTCGC GCTGGATCTC GTAAACGATC CTGTGCTGAT AGCGGAATAC 
GAAGCCTATC ATCGTGAGAT ATGGCCTGAA ATAAGAAAGA GTATCGTTGA CAGCGGTATC
ACCAATATGG AGATCTATCG CATCATGGAC CGTCTTTTTA TGATCATGGA AGTAAACGAA
AGTTTCTCTT TTGATGCAAA AGGAGCGGCG GATGCGGCGA ATCCTAAAGT GCAGGAATGG
GAAAAGCTGA TGTGGAAATA TCAGCAGGCC CTGCCGGTAG CTAAACCCGG TGAGAAATGG
GTGATGATGG ACAGGATTTT TTCGCTACAG TAA
 
Protein sequence
MKRYCLALDL VNDPVLIAEY EAYHREIWPE IRKSIVDSGI TNMEIYRIMD RLFMIMEVNE 
SFSFDAKGAA DAANPKVQEW EKLMWKYQQA LPVAKPGEKW VMMDRIFSLQ