Gene Cpin_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1983 
Symbol 
ID8358134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2422722 
End bp2423480 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content51% 
IMG OID644964171 
ProductMethyltransferase type 11 
Protein accessionYP_003121680 
Protein GI256421027 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.600797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGA ACGCTGAATT ATATAAGGAA AAGCACTCTT TTGTATTCGG TTACGGTAAT 
AACCTGATCG AATGGCTGCA GCCGGCAGCA GGAGAACAGA TACTGGATCT TGGCTGTGGT
ACCGGCGAAC TGACCGCTCA GGTGGCGGAA AGCGGCGCCA AAGTAACAGG GCTGGATAGT
TCTCCTGCGA TGATCGCCAG TGCAAAGGAG CATTTTCCAC AGGTTACTTT CCAGGTGGCA
GATGCTACCT CTTTCTCCCT GCCGGAGCAG TTTGATGCGG TGTTTTCCAA CGCTACCCTG
CACTGGATCC GCCAGCAGGA GAAGGCGCTG GATCGTATTC ACCAGCACCT GAAGCCTGGT
GGTCGTTTTG TCCTGGAAAT GGGCGGTAAG GGAAATGTGG ACGACATCAC CGGTGCACTG
GAGAAAGCGA TGGCCGACAG AGGATATACT TATAAACCAT TCTGGTATTT CCCTTCAGTG
GGAGAGTATA CCTCGCTGCT GGAAGAGTAT GGATTCAGAA TCAACCAGGT CCTTTACTTT
GACCGTGAGA CCGAACTGGC AGACCCTGAG AATGGCATTG TGGAATGGCT GCAGATGTTT
GGATCGCACT TCCTGGACCA GGTACCGGAG CAGGATAGAT TACCTCTCCT GCAGGAAGTA
CAGGAGTCGC TGCGGGCGAC TAACTTCCGC GATGGTAAAT GGTATTCGAA GTACGTGCGC
TTGCGTGTAA AAGCAGAAAA AATTAAAACA GATCTTTAA
 
Protein sequence
MSWNAELYKE KHSFVFGYGN NLIEWLQPAA GEQILDLGCG TGELTAQVAE SGAKVTGLDS 
SPAMIASAKE HFPQVTFQVA DATSFSLPEQ FDAVFSNATL HWIRQQEKAL DRIHQHLKPG
GRFVLEMGGK GNVDDITGAL EKAMADRGYT YKPFWYFPSV GEYTSLLEEY GFRINQVLYF
DRETELADPE NGIVEWLQMF GSHFLDQVPE QDRLPLLQEV QESLRATNFR DGKWYSKYVR
LRVKAEKIKT DL