Gene Cpin_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1975 
Symbol 
ID8358126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2413296 
End bp2414267 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content42% 
IMG OID644964163 
ProductRibonucleoside-diphosphate reductase 
Protein accessionYP_003121672 
Protein GI256421019 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.137006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAG AGAATGAACT GCTTTTAAAG GAAAACAAAG ACAGATTTGT ATTGCTGCCT 
ATCAATTATC CGAAAGTATG GGAGAAATAC AAACAACATG AGGCTAGTTT CTGGACAGCA
GAGGAGATCG ATCTCAGTGC AGATATGAAG GACTGGAATA ATCTCAACGA TGGGGAACGT
CATTTCATTA CCCATGTACT CGCATTTTTC GCAGCAAGTG ATGGTATCGT TAACGAAAAC
CTCGCTGTTA ATTTCATGAG TGAAGTACAG TTACCCGAAG CACGTTGCTT CTATGGTTTC
CAGATCATGA TGGAAAACAT CCACTCTGAA ACATATGCAT TATTAATAGA CACTTATGTA
AAAGATCCGG TTGAAAAAGA TCGCCTGTTC CATGCAATAG AAACAGTTCC TGCCGTTACT
AAAAAAGCGA AGTGGGCATT GCGCTGGATT GAAAACGGCA ACTTCGCTGA GCGTCTTGTA
GCATTTGCAG CTGTAGAAGG TATCTTCTTC AGTGGCAGTT TCTGCTCTAT ATTCTGGCTG
AAGAAAAGAG GCCTGATGCC AGGTCTGACC TTCTCCAATG AACTGATCAG CCGTGATGAA
GGATTACATT GCGAATTTGC ATGTCTGCTG TATGGTATGC TGGAAAACAG ACTGCCGGAA
GAACAGGTGC ACACTATTAT CCGCGATGCA GTAGCCATCG AAAAAGAATT CATCACTGAT
GCATTACCGG TAGCACTGAT CGGTATGAAC AGTAAGTTAA TGAGCGAATA CATTGAGTTC
GTTGCAGATC GTTGGTTAAG TGAACTGGGA TATACTAAAA TATTTAACAC AGCAAATCCG
TTTGACTTTA TGGAGATGAT TTCTCTCCAG GGTAAAACAA ACTTCTTCGA AAAACGCGTG
GGAGACTATC AGAAAGCAGG CGTAATGTCC GGTAAGGATA CACAGACTTT CAGTCTTGAC
GAAGACTTCT GA
 
Protein sequence
MNLENELLLK ENKDRFVLLP INYPKVWEKY KQHEASFWTA EEIDLSADMK DWNNLNDGER 
HFITHVLAFF AASDGIVNEN LAVNFMSEVQ LPEARCFYGF QIMMENIHSE TYALLIDTYV
KDPVEKDRLF HAIETVPAVT KKAKWALRWI ENGNFAERLV AFAAVEGIFF SGSFCSIFWL
KKRGLMPGLT FSNELISRDE GLHCEFACLL YGMLENRLPE EQVHTIIRDA VAIEKEFITD
ALPVALIGMN SKLMSEYIEF VADRWLSELG YTKIFNTANP FDFMEMISLQ GKTNFFEKRV
GDYQKAGVMS GKDTQTFSLD EDF