| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1974 |
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| Symbol | |
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| ID | 8358125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2410797 |
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| End bp | 2413205 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964162 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_003121671 |
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| Protein GI | 256421018 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.150838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTAA TTAAGCGCGA CGGCCACAAA GAAGCTGTTA AGTTTGACAA GATTACTGCT
CGTGTTGAAA AGCTGTGTTA TGGACTGAAT GCGGAGTACG TAGACGCCAT AGACGTAGCA
AAGAAAGTGA TACAGGGTTT ATATGATGGA GTAACAACCA GTGAACTGGA TAATCTTGCC
GCAGAAACTG CAGCATCGCT TACTACAAAA CATCCTGACT ATGCCTTGCT CGCATCGCGC
ATCGCGGTGA GCAATCTCCA TAAAAATACA GTGAAATCAT TCTCCAAAAC AATGGAGAAC
CTGTATAACT ACATCGATCC GAAAGTGGGC AAACCAGCAC CACTGTTAGC TGACGATGTA
TATGAGATCG TCATGAAACA TGCTGCTATC CTGGATTCCA GCATCATCTA TGATCGTGAC
TTTGCATTTG ATTATTTTGG TTTCAAAACA CTGGAACGTT CTTACCTGCT GAAATTAGAT
GGTAAAGTGG CTGAACGTCC GCAGCATATG TTCATGCGTG TGTCTGTTGG TATCCACAAA
GAAGATATCG ATGCTGTAAT CAAGACATAC AATCTGATGA GTGAGCGTTG GTTTACACAC
GCAACTCCTA CCCTCTTTAA TGCTGGTACA CCTAAACCAC AGATGTCCAG CTGCTTCCTC
CTTACCATGC AGGATGATAG TATCGAGGGT ATCTACGATA CACTGAAACA AACTGCAAAG
ATCTCCCAGA GTGCTGGTGG TATTGGTCTG AGCATCCACA ATATCCGCGC TACAGGTTCT
TATATCAGCG GTACCAACGG TACCTCTAAT GGTATCATTC CAATGCTGCG TGTATTCAAT
GATACTGCAC GTTATGTAGA CCAGGGCGGT GGTAAACGTA AAGGCGCTTT CGCGATCTAC
CTGGAACCAT GGCACGCTGA TATCTTCGAA TTCCTTGACC TGCGTAAAAA CCATGGTAAG
GAAGAAATGC GTGCAAGAGA TCTCTTCTAT GCACTGTGGG TACCAGATCT GTTCATGAGA
CGTGTAGAAG AAAATGGCGA CTGGAGCCTG TTCTGTCCAC ACGAAGCACC AGGACTGCAC
GAATGCTGGG GTGAAGAGTT CGAAAAACTC TACACAAAAT ATGAGAAAGA AAACCGTGCA
CGTAAAACAG TAAAGGCACA GGATCTCTGG TTCGCCGTAC TGGATGCACA GATTGAAACA
GGTACTCCTT ACCTGCTGTA CAAAGATTCT GCAAACCGCA AATCTAACCA GCAGAACCTG
GGTACTATTA AAAGTTCCAA CCTGTGTACG GAGATCATCG AATATACCGA CGCAAATGAA
GTAGCCGTAT GTAACCTGGC TTCCCTGGCA CTGCCACGCT TCGTAATCGA CGGTCAGTTC
GATCACGAAA AACTGTACGA AGTTACTTAT CAGGCAGCGC TGAACCTCAA CCGTATCATC
GATAATAACT TCTACCCGGT AGATGAAGCA CGTAACAGTA ACCTCCGTCA CCGTCCTATC
GGTCTGGGTG TACAGGGTCT TGCTGATGCG TTCATCCTGA TGCGTTATCC ATTCGAAAGC
GAAGAAGCGA AAAAACTGAA CAGCGAGATC TTCGAAACCA TCTACTTTGC TGCATTGAAT
GCATCAAAAG ACCTGGCTAT CAAAGACGGC GCTTACGAAA CATATGCAGG TTCACCGGTA
TCAAAAGGTA TCCTTCAGTT TGACATGTGG GGTGTAACAC CTTCACCACG CTGGGACTGG
ACTTCACTGA AAGGAGAGAT CAAAAAACAT GGTGTGCGTA ACTCCCTGTT GCTGGCGCCA
ATGCCAACCG CATCTACCTC TCAGATCCTG GGTAACAATG AATGTTTCGA ACCTTACACA
TCCAACATCT ACACCCGTCG CGTACTGAGC GGTGAATTCG TAGTAGTAAA TAAACACCTG
CTGAAAGATC TGGTGGAACT GGGTCTGTGG GATAATGATA TGAAGAATAA GATCATTACT
TCCAATGGCT CTATCCAGCA TATTCCTGAG ATCCCTTCAC AGATCAAGGA GCTGTATAAA
ACAGTATGGG AAATCAAACA ACGTACAATC ATTGACATGG CAGCCGATCG CGGTGCTTTC
ATCTGCCAGT CTCAGTCACT GAACCTGTTC GTTGATACGC CTTCCGCAGC GAAACTGACG
TCTATGCACT TCTACGCATG GAAGAAAGGT CTGAAAACAG GTATGTACTA CCTGCGTACA
CAGGCAGCTG CCCAGGCAGT ACAGTTTACT GTTGAAAAAC AAGGCGGTCA ACAGATGGAA
CCAATGGTGG AAAAGAAAGC TGGTGAAGCT AAAGCTGCCA AAGCAGTGGA CACCAAACTC
GACGAAGTTG AATTTGTTGA GGGCGCAGTC TGCACCATGG AAGAAGGTTG CGTAACCTGC
AGCGCCTGA
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| Protein sequence | MFVIKRDGHK EAVKFDKITA RVEKLCYGLN AEYVDAIDVA KKVIQGLYDG VTTSELDNLA
AETAASLTTK HPDYALLASR IAVSNLHKNT VKSFSKTMEN LYNYIDPKVG KPAPLLADDV
YEIVMKHAAI LDSSIIYDRD FAFDYFGFKT LERSYLLKLD GKVAERPQHM FMRVSVGIHK
EDIDAVIKTY NLMSERWFTH ATPTLFNAGT PKPQMSSCFL LTMQDDSIEG IYDTLKQTAK
ISQSAGGIGL SIHNIRATGS YISGTNGTSN GIIPMLRVFN DTARYVDQGG GKRKGAFAIY
LEPWHADIFE FLDLRKNHGK EEMRARDLFY ALWVPDLFMR RVEENGDWSL FCPHEAPGLH
ECWGEEFEKL YTKYEKENRA RKTVKAQDLW FAVLDAQIET GTPYLLYKDS ANRKSNQQNL
GTIKSSNLCT EIIEYTDANE VAVCNLASLA LPRFVIDGQF DHEKLYEVTY QAALNLNRII
DNNFYPVDEA RNSNLRHRPI GLGVQGLADA FILMRYPFES EEAKKLNSEI FETIYFAALN
ASKDLAIKDG AYETYAGSPV SKGILQFDMW GVTPSPRWDW TSLKGEIKKH GVRNSLLLAP
MPTASTSQIL GNNECFEPYT SNIYTRRVLS GEFVVVNKHL LKDLVELGLW DNDMKNKIIT
SNGSIQHIPE IPSQIKELYK TVWEIKQRTI IDMAADRGAF ICQSQSLNLF VDTPSAAKLT
SMHFYAWKKG LKTGMYYLRT QAAAQAVQFT VEKQGGQQME PMVEKKAGEA KAAKAVDTKL
DEVEFVEGAV CTMEEGCVTC SA
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