| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1972 |
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| Symbol | |
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| ID | 8358123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2409094 |
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| End bp | 2409687 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964160 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_003121669 |
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| Protein GI | 256421016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0293079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG AACGTAGAGA AAGGTTACTA TCCGTATTAA ATAAAAGACA GGCAGGTTTA
ACTGTCGTCC TGGAAAATGT ATTTGATCCG CATAATATAT CTGCGGTGTT GCGTACATGT
GATGCTGTAG GCATCCAGGA TGTCTATGTA TTGAACACTA CGACTGCCCG TCGCAAGAGA
TGGGGGCACA AGAGTTCTTC CAGTGCAGCC AAGTGGCTGA CAGTCCACCA GTTTAGTGAC
ACAGCTACCT GTATGGCGGT TGTAAGGGAA AAGTACGATA AGATCTATAC GACGCACCTG
GCGGCGGATG CAAAGAGTCT GTATGAGCTC GATTTTACAG GTTCTGTAGC GCTGGTATTC
GGTAATGAGC AGGAGGGCGT AAGTGAGGAG ATCAGGAAAT TATGCGACGG TAATTTTATC
ATTCCTCAGG TGGGCATTAT CAAATCGTTG AATATTTCCG TGGCTTGTGC CGTTAGCATA
TATGAGGCAA TGAGGCAAAA ATCGATTGCT GGCCATTATG AACAAAAAAA CCTGCCGGAT
GCTCAATACA ATGCATTGTT GGAGGAGTGG GGCTTTCAGG AAGAAGATAT GTGA
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| Protein sequence | MTPERRERLL SVLNKRQAGL TVVLENVFDP HNISAVLRTC DAVGIQDVYV LNTTTARRKR
WGHKSSSSAA KWLTVHQFSD TATCMAVVRE KYDKIYTTHL AADAKSLYEL DFTGSVALVF
GNEQEGVSEE IRKLCDGNFI IPQVGIIKSL NISVACAVSI YEAMRQKSIA GHYEQKNLPD
AQYNALLEEW GFQEEDM
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