| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1958 |
|---|
| Symbol | ubiA |
|---|
| ID | 8358109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2389868 |
|---|
| End bp | 2390809 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644964146 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_003121655 |
|---|
| Protein GI | 256421002 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC TGATTGCCTT CTTCAGGCTG GTCCGATATC CAAATCTTAT TTATATAGCG
CTGACCCAAT TCCTGTTACA GTATTGCGTG GTGGCGCCGG TACTGACCTA TAACGGAGAA
ACGCCTTCGC TTTCCTGGCT GTCTTTCTGC CTGTTATCTT TCTCTACAGT GCTGATAGCG
GCTGCAGGCA ATATTATCAA TGACTATTTT GACATCAATA TAGATATCAT CAACAAGCCG
GAAAAGATGG TGCTTGATAA GATCATCAAT CGCCGCTGGG CGATGGCCTG GCACACCATA
TTTAATATGG CCGGCGTTTC CATTGGCTTT ATTGTGGCCT GGCGTATCGG TGTGATCTAC
CTCGGATTTA CCCAGGTGAT CTGCTCCCTG ATACTCTGGT TTTATTCTAC CTCTTTCAAA
CGTCAGGTGC TGATCGGGAA CGTACTGATT TCATTGCTGA CGGCGCTGGC GGTAGTGGTA
GTCGGCTTTT ATGAGAAGCA GATTTATGAA AGCTTCGAAG CCATCATGTC GCCCATCGGC
AGAAAGCTGA TACAGGTGAT CGGCGTATAT GCCCTGTTCG CTTTTATCAT TTCCCTGATC
CGGGAAATCG TAAAAGACCT GGAAGATATG CTGGGGGATA GCAAAGACGG TTGCCGTACT
ATTCCGATTG TATGGGGTGT GAATCCGGCC AAACAGATCT GTAATGCACT GATGCTGGCA
TTGCTGATCC TGATCCTGCT GGTGCAGATC CGGATTGCGT TTATCGGCTG GTGGCCGGCT
ATTATCTATC TGGCACTGCT GGTTCAGGCG CCTGTTTTTT ATATTTATAT CCTATTGAAA
AAGGCACATC TGCCGGAACA TTATCATAAA GTGAGTTCGC TTGTGAAATG GCTGATGCTG
TCTGGTATTC TTTCCATGAT CTTCTTTAAA ATATTGCTCT GA
|
|---|
| Protein sequence | MKLLIAFFRL VRYPNLIYIA LTQFLLQYCV VAPVLTYNGE TPSLSWLSFC LLSFSTVLIA
AAGNIINDYF DINIDIINKP EKMVLDKIIN RRWAMAWHTI FNMAGVSIGF IVAWRIGVIY
LGFTQVICSL ILWFYSTSFK RQVLIGNVLI SLLTALAVVV VGFYEKQIYE SFEAIMSPIG
RKLIQVIGVY ALFAFIISLI REIVKDLEDM LGDSKDGCRT IPIVWGVNPA KQICNALMLA
LLILILLVQI RIAFIGWWPA IIYLALLVQA PVFYIYILLK KAHLPEHYHK VSSLVKWLML
SGILSMIFFK ILL
|
|---|
| |