| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1953 |
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| Symbol | |
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| ID | 8358104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2382445 |
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| End bp | 2384580 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964141 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003121650 |
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| Protein GI | 256420997 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAA TGAAAGTGAT TATACCAGTT GCCCTGCTCT CCATCTCAAT GGGGGTTTTA
GCATTCAGCA AACTGCATAA ACAAGACCCT CCGGGCAGAT ACGAAGTGAT CATGGGCCTG
GTAGGACAAA TACTCACTCA GGGACACTAT CAGCCTAAGG AGATTAATGA CGCCTATTCA
AAGGAAGTTT TTGATAAATA TCTGAAGAGC CTGGACCCCG AGAAGAAGTT TTTCCTGAAA
AGTGATGTGC AGGGACTGCA AACAGTCGCG ACACATATCG ATGATGAACT GCAGGGTGCT
CCATTGGATT GCTTCAATGC GGTGAACACG CTGATCAAAC AGCGTGTAAC CGAAGCAGCA
GCGATCTATC CGGAACTGCT CTCGCAGCCA TTTGATTTCA GCAAAGAGGA AAAAGTAACA
CTGGATCCTG ATAAAATCGA TTATCCTGCC GATGCGGAAG CCCGCAAGGA CGCCTGGAGG
AAAGTGTTGA AATATCGTGT GCTGGAGAAA TATGTAGAGT TACAGGAAAG CCGCGACAAA
CAAAAAGATC AGAAAGATAA AGCAGCTGCC GAAAAACCTA AGACCGATGC TGAACTGGAA
GCAGAAGCAA GGACGAAGGT GAAAAGCGTA TATGACCGTT ACTTTGATCG TTTGAAAAAC
AAACAGGATG ATAACGAACG TTTCAGCCTG TTTATCAATG CGATCACCAC TACCATGGAC
CCGCACACTG ACTTCTTCCC GCCTGCTGAA AAGCGTGCAT TTGAAGAGCA GATGGCTGGT
AAGTTCTTCG GTATCGGCGC TCAGCTGAAA GAAGAAGATG GTAAGATTAA AATCACCAGC
ATCGTAACTG GTAGCGCCAG CTGGAAAGAC GGTCGTCTTA AAGCGAATGA CGCGATCCTG
AAAGTAGCGC AGGGTGATAA AGAACCTGTA GACGTAACCG GTTATGCCGT TGAAGATGCG
GTAAAACTGA TCCGTGGTAG CAAAGGTTCT GTGGTGAAAC TGACCGTGAA GAGTGTAGAT
GGTACACAGA AAGTGATTGA CATCGTGCGT GATGAAGTGG TACTCGACGA TACATTTGCG
AAATCAGCCA TTATCAATGG CCAGCACAAA CTGGGTTATA TCTATCTGCC TGAATTCTAT
GCAGACTTCA ACGACAGAAA TGGCGCCCGT TGTGCAGAAG ACGTTGCAAA AGAGATCACC
AAACTGAAAG CAGAGAATGT AGAAGGTATT ATTCTTGATC TGCGTTTCAA TGGTGGTGGT
TCCCTGCAGG ATGTTGTACA GATGGCCGGC CTGTTCATTC CGGAAGGTCC GATCGTACAG
GTAAAATCCC GTAGCGGCGA TCCGATGATC CTGCGTGACC GTGATAAGAG TGTACAGTAT
GGTGGTCCGC TGGCCATCAT GGTGAATGAA TACAGCGCTT CCGCTTCTGA GATCATGGCT
GCTGCCATGC AGGATTACAA ACGTGCGGTG ATCATTGGTA GCAATACCTT TGGTAAAGGT
ACCGTACAGC GTATGCTGAA CCTGGACGAC TTCTATTCCA ATAAGGAAAT AGGGGCACTG
GGAGCGATCA AACTGACACA GCAGAAATTC TACCGTGCAA ACGGTGGTTC TACACAGCTG
AAAGGTGTGA CTTCCGATAT CCTGCTGCCA GATCCTTATT ATGAAGTAGC AGAACGTAAA
GATGATGATG CGCTGGCATG GGATGAAATT CCTAAAGCGC CTTACACTAC CTGGATCGAT
CCGGTGCCTG TAGATGCACT GAAGAGAAGC AGCGAAAAAC GTATGGCTTC CAGTGAGGCA
TTCAAAATGA TGAATGAAAA TATCACCACC CTGAAGAAAA TGGAAAGCCA GGAAACGTAT
TCACTGAATA TGCTGACGTA TAAAGCAGAG CAGAAGACGA ACACCAATGC CCTGAAACGT
TATGACGCAG TGAATGACAA GGTGAAAGAA TTGAACATTG TTAGTCTAAG AGTTGACCTG
GACAGACTGG CCAGCGATTC TTCTAAACTG GCACGCAATA AAGACTGGTT GAAATTCAGA
CAAAAAGATA TCTATCTGGA TGAAGCAGTG AATGTGATGA ATGACCTGAT TGCCTTGTCT
TATCCAAAAT TACAGGGTAA ACCGGCCAAT AAATAA
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| Protein sequence | MRRMKVIIPV ALLSISMGVL AFSKLHKQDP PGRYEVIMGL VGQILTQGHY QPKEINDAYS
KEVFDKYLKS LDPEKKFFLK SDVQGLQTVA THIDDELQGA PLDCFNAVNT LIKQRVTEAA
AIYPELLSQP FDFSKEEKVT LDPDKIDYPA DAEARKDAWR KVLKYRVLEK YVELQESRDK
QKDQKDKAAA EKPKTDAELE AEARTKVKSV YDRYFDRLKN KQDDNERFSL FINAITTTMD
PHTDFFPPAE KRAFEEQMAG KFFGIGAQLK EEDGKIKITS IVTGSASWKD GRLKANDAIL
KVAQGDKEPV DVTGYAVEDA VKLIRGSKGS VVKLTVKSVD GTQKVIDIVR DEVVLDDTFA
KSAIINGQHK LGYIYLPEFY ADFNDRNGAR CAEDVAKEIT KLKAENVEGI ILDLRFNGGG
SLQDVVQMAG LFIPEGPIVQ VKSRSGDPMI LRDRDKSVQY GGPLAIMVNE YSASASEIMA
AAMQDYKRAV IIGSNTFGKG TVQRMLNLDD FYSNKEIGAL GAIKLTQQKF YRANGGSTQL
KGVTSDILLP DPYYEVAERK DDDALAWDEI PKAPYTTWID PVPVDALKRS SEKRMASSEA
FKMMNENITT LKKMESQETY SLNMLTYKAE QKTNTNALKR YDAVNDKVKE LNIVSLRVDL
DRLASDSSKL ARNKDWLKFR QKDIYLDEAV NVMNDLIALS YPKLQGKPAN K
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