Gene Cpin_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1949 
Symbol 
ID8358100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2376349 
End bp2377026 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content36% 
IMG OID644964137 
Producthypothetical protein 
Protein accessionYP_003121646 
Protein GI256420993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATC TGAGTAGAAA CAAAGTTTAT CAGAAGGTCG AGGTTGGCAA AGATGCACGT 
AAAATCTATA TCTTTTGTGA AGGAGAAAAA CGAGAAATAG AATACTTTAG ATACTTTCAA
GGCTTTTCCT CAGCAATAGA AATTATTCCA ATTCCCTCCG AAAATGGATT GTCTGATCCC
ACAAAATTGA TGGAAAATAC CCAGAAAATA TTTTTTGATC CGTCGCCACG TTATCTATTA
AGCCATGAGC AGGGAGATGA GGTTTGGTTT GTTATTGATA CTGATAGATG GAATGAAAAG
AACAAGATTG CATCACTCCG TGATCATTGT AGTAATAAAA ACGGAGAGGC GGGACCAATG
TGGTTTATAG CGCAGAGTAA TCCCTGTTTT GAAATCTGGC TCTATTATCA TTTTTTTAAT
TACAACCCAA ATGAAGAACA TATTCGTAGT GGCTTGTCAT TTAAGCAATA TGTAGCTACT
ATGATTCCTG GTGGGTTTGA TAGTAGGTCA ATGCCTATAG CAATTCAATC AGCAATTCTT
AATTCTGAAA CACATTATGA AGAGGTGGAG AATCAGCCAG TGGTATACGC GACTGAGGTC
TTTAAACTTG GCAAAGTAAT ATTGCCTTAT ATAAAAGATG CTCTTGATTT GATTTTACCA
ACTTTAAACA AAATATGA
 
Protein sequence
MRYLSRNKVY QKVEVGKDAR KIYIFCEGEK REIEYFRYFQ GFSSAIEIIP IPSENGLSDP 
TKLMENTQKI FFDPSPRYLL SHEQGDEVWF VIDTDRWNEK NKIASLRDHC SNKNGEAGPM
WFIAQSNPCF EIWLYYHFFN YNPNEEHIRS GLSFKQYVAT MIPGGFDSRS MPIAIQSAIL
NSETHYEEVE NQPVVYATEV FKLGKVILPY IKDALDLILP TLNKI