Gene Cpin_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1946 
Symbol 
ID8358097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2373746 
End bp2374096 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content41% 
IMG OID644964134 
Productprotein of unknown function DUF419 
Protein accessionYP_003121643 
Protein GI256420990 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG AGCAATTCCG GGAATACTGT CTGGCCCTGC CAGGCGTGAC TGAAGAGTTT 
CCTTTTGGCG AAGAAATACT CGTATACAAG GTGAAAGGAA AATTATTTAC CCTGACACAT
CTTGATAACT TCGAAACCAT TAATCTGAAA TGTGATCCGG AGATAGCTAT AGAGCTGCGT
GAGCGATATG ATGGCGTTAC ACCGGGTTAT CACATGAACA AGAAACACTG GAATACCATA
GATGTACATT CCAATATCCC CAATAAACTG ATACTTCAGT GGATAAAAGA CTCTTACGAC
CTCGTTGTAA AATCACTGCC AAAAAAAGAC AGGGAAAGCC TGTTATCTTA G
 
Protein sequence
MNIEQFREYC LALPGVTEEF PFGEEILVYK VKGKLFTLTH LDNFETINLK CDPEIAIELR 
ERYDGVTPGY HMNKKHWNTI DVHSNIPNKL ILQWIKDSYD LVVKSLPKKD RESLLS