Gene Cpin_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1944 
Symbol 
ID8358095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2371035 
End bp2371757 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID644964132 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003121641 
Protein GI256420988 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAA AAGCCCTATT ACTTGGAGTT TTGGGCGTGG CTACCCTTCC GGGTTACGCG 
CAAAAGAAAA AGAAGTCTAA AAAAGACGAA GCGGTTCCGG TAGCAGTAGC GCCGGCTCCA
TTATTACAGA CCAAACTGGA TACGATCAGT TATGCGATTG GCCTGGAATT TGGCAGTATG
TTGAAAATGC AGGGACTGGA CAGCGTTAAA ACAGAAGTAC TGTCCAAAGC ACTGACCGAT
GCCATGAATA ACGGCACCCC TTTGATTACT AAAGAACAAG GCAATATGAG TGTAAGTGAT
TATTTACAAC AGTTAAAAGC GGAAAAAATG CAGAAAAACA AAGTAGCCGG CGAACAGTTC
CTGGCGGAAA ATAAAACTAA ACCAGGTGTG GTTGCGCTGC CAAGCGGCCT GCAATACCAG
GTGATCACTG AAGGTACAGG TCCAAAACCT GGCCTCAATG ACAAAGTAAA AACACACTAC
CACGGTACAC TGATCGATGG TACTGTATTT GACAGCTCAG TAGAAAGAGG TCAGCCGATC
TCCTTCCCTG TCAGCGGTGT TATCAAAGGC TGGACAGAAG CTTTACAGTT AATGCCTGTA
GGTTCCAAAT GGAAGCTGTT CATTCCTTCT GATCTGGCTT ACGGTGAGCG TCAGGCAGGA
CCAAAAATCG GCCCTAACAG CGCGCTGGTA TTCGAAGTAG AACTGATTGC TATTGAGAAA
TAG
 
Protein sequence
MIRKALLLGV LGVATLPGYA QKKKKSKKDE AVPVAVAPAP LLQTKLDTIS YAIGLEFGSM 
LKMQGLDSVK TEVLSKALTD AMNNGTPLIT KEQGNMSVSD YLQQLKAEKM QKNKVAGEQF
LAENKTKPGV VALPSGLQYQ VITEGTGPKP GLNDKVKTHY HGTLIDGTVF DSSVERGQPI
SFPVSGVIKG WTEALQLMPV GSKWKLFIPS DLAYGERQAG PKIGPNSALV FEVELIAIEK