| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1942 |
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| Symbol | |
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| ID | 8358093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2368546 |
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| End bp | 2369826 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964130 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003121639 |
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| Protein GI | 256420986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTAA CAATATCGCC CGGCGCTATC AGTGGTACAG TGACCGCCAA TCCTTCCAAA
AGTGCGATGC AACGTGCAGT TGCAGCCGCA TTACTGAGCA ATGGCACCAG CATTATCCGT
AATCCCGGTC TGAGCAATGA CTGCCTGGCA GCATTGGACG TAGCGGGAAA ACTGGGTGCT
GAGATTAAGC GTAATGAAGA TCATATCGAA ATAACAAGCA AAGGTATACA TCCTGTATCC
GAAGAGATCA ACTGTGGTGA ATCCGGTTTG GGTATCCGTA TGTTCACTCC CATAGCAGCG
CTTTCTGAAA AAGCCATTAC CATTAATGGT CATGGTAGTC TGACGGTACG TCCGATGGAC
TTCTTCCAGG AAGTACTGCC TCAGCTGGAT GTTAAATGCA GCACCCGGGA AGGCAGGCTG
CCATTGAACA TCCAGGGACC TTTGCAACCA AAGAATATTA CGATCGACGG ATCACTCAGT
TCACAGTTCC TGACCGGTTT GCTGATGGCA TACGGCGCTG CTGCAGAAGA TGTGACCATC
ACCGTAAAAG ATCTGAAAAG CAAACCTTAC ATCGCACTCA CCCTGCAACT GATGCAGCAG
TTTGGTGTAC AGGTAAAAGA AGAGCAATAC GAGCAATTCC ACTTCGGTAA GCGTCAGTCT
TACAAGGCAG GCGAATACAC AGTAGAAGGT GACTGGAGCG GTGCTGCTTT CCTGCTGGTG
GCTGCAGCTG TAGCTGGTAA AGCGGAAGTG CATCACCTGA ATACACAATC CGCACAATCT
GATAAAGCAA TCCTGGAAGC ACTGGAAAAA GCAGGCGCTG GTCTGCTGCC AGGCGTATTC
ACCGTGGTTG TGGAAAAACA GCAACTGCAG GCGTTTGATT TCGACGCAAC TGATTGTCCT
GATCTGTTCC CTCCGCTGGT AGCACTGGCT GCTAACTGCC AAGGCACAAC GAAAATTATA
GGTGTGAACA GACTCGCGCA TAAAGAAAGC GATCGTGGTA AAACACTGCA GGAAGAATTC
GGTAAAATGG GTATCGCAAT TGACCTGCAT GGCGATGAAA TGCTGGTACA TGGCGGCACC
GGTATTAAAG GCGCGGTTGT AAGTTCCCAC AATGACCACC GTATTGCAAT GGCTTGCGCA
GTAGCGGCTT TGACTGCTGA TGCACCTGTT ATCGTTGAAG ATGCAGAAGC CATTAACAAA
TCATACCCTG AATTCTACGA TCATCTGGAG AAGCTCGGCG GTATAGTAAA AAAGCAGGGT
ACAGCAAGCC TGACGCATTA A
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| Protein sequence | MQVTISPGAI SGTVTANPSK SAMQRAVAAA LLSNGTSIIR NPGLSNDCLA ALDVAGKLGA
EIKRNEDHIE ITSKGIHPVS EEINCGESGL GIRMFTPIAA LSEKAITING HGSLTVRPMD
FFQEVLPQLD VKCSTREGRL PLNIQGPLQP KNITIDGSLS SQFLTGLLMA YGAAAEDVTI
TVKDLKSKPY IALTLQLMQQ FGVQVKEEQY EQFHFGKRQS YKAGEYTVEG DWSGAAFLLV
AAAVAGKAEV HHLNTQSAQS DKAILEALEK AGAGLLPGVF TVVVEKQQLQ AFDFDATDCP
DLFPPLVALA ANCQGTTKII GVNRLAHKES DRGKTLQEEF GKMGIAIDLH GDEMLVHGGT
GIKGAVVSSH NDHRIAMACA VAALTADAPV IVEDAEAINK SYPEFYDHLE KLGGIVKKQG
TASLTH
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