Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1937 |
Symbol | |
ID | 8358088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2363445 |
End bp | 2364269 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964125 |
Product | Chorismate mutase |
Protein accession | YP_003121634 |
Protein GI | 256420981 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCG CGATCCAGGG TTTTGAAGGA TGTTTTCATC AGATAGCAGC AGAGGCTTAT TATGGTAAGG GAATAGAGAT AGAATGTTGC GCATCCTTTC CGGAACTCGT TAAGAAAGTA AGTAAACAGA AAGATGCAGA CGCTGGTGTG ATGGCCATCG AAAACTCCAT CGCCGGCAGC ATTCTGCCAA ACTATTCGCT GCTAAAAAAC TCAGGTCTGC ACGTAATCGG TGAGGTTTAC CTGCATATCA GACAACACCT GATGGTGTTG CCGGGCCAAA CCCTGGAAGA TATACGCGAA GTACATTCAC ATCATATGGC GCTGCTCCAG TGTACAGAGT TCCTGGAAAA GCATCCGCAT ATGAAACTGG TGGAAACAGA AGATACTGCG CTCAGTGCCA AACACGTTGC GCAGAAGAAA CTGAAAAGCA CCGCAGCCAT CGCCGGTAAA CTGGCCGCTG ATATATATGG TCTGGAAATC ATCGCACCGA ATATCCATAC CATCAAAAAC AACTATACCC GCTTCCTGGT TATTTCTCCC AACGGAGTAA CACCAGCGCC GGATGCCAAT AAAGCCTCCG TTTACTTCCA GACCTCTCAC GAGCGCGGAA GTCTGGCAAA GGTGCTGACA CAGGTCGCAC AGGCAGGGAT CAACCTGAGT AAAATACAGT CCTTCCCAAT GCCTGCTAAA GAATGGAACT ATTACTTCCA CGCGGATTTC GAATTTGAGA ACCTGAGCCA CTTTGAAAAA AGCATCAGCA AAATTCAGCC GCTGACAGAA GATCTCAAGG TATTAGGTAT CTATCAGAAG GGAAACACAC ATTAA
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Protein sequence | MRIAIQGFEG CFHQIAAEAY YGKGIEIECC ASFPELVKKV SKQKDADAGV MAIENSIAGS ILPNYSLLKN SGLHVIGEVY LHIRQHLMVL PGQTLEDIRE VHSHHMALLQ CTEFLEKHPH MKLVETEDTA LSAKHVAQKK LKSTAAIAGK LAADIYGLEI IAPNIHTIKN NYTRFLVISP NGVTPAPDAN KASVYFQTSH ERGSLAKVLT QVAQAGINLS KIQSFPMPAK EWNYYFHADF EFENLSHFEK SISKIQPLTE DLKVLGIYQK GNTH
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