Gene Cpin_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1937 
Symbol 
ID8358088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2363445 
End bp2364269 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content47% 
IMG OID644964125 
ProductChorismate mutase 
Protein accessionYP_003121634 
Protein GI256420981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CGATCCAGGG TTTTGAAGGA TGTTTTCATC AGATAGCAGC AGAGGCTTAT 
TATGGTAAGG GAATAGAGAT AGAATGTTGC GCATCCTTTC CGGAACTCGT TAAGAAAGTA
AGTAAACAGA AAGATGCAGA CGCTGGTGTG ATGGCCATCG AAAACTCCAT CGCCGGCAGC
ATTCTGCCAA ACTATTCGCT GCTAAAAAAC TCAGGTCTGC ACGTAATCGG TGAGGTTTAC
CTGCATATCA GACAACACCT GATGGTGTTG CCGGGCCAAA CCCTGGAAGA TATACGCGAA
GTACATTCAC ATCATATGGC GCTGCTCCAG TGTACAGAGT TCCTGGAAAA GCATCCGCAT
ATGAAACTGG TGGAAACAGA AGATACTGCG CTCAGTGCCA AACACGTTGC GCAGAAGAAA
CTGAAAAGCA CCGCAGCCAT CGCCGGTAAA CTGGCCGCTG ATATATATGG TCTGGAAATC
ATCGCACCGA ATATCCATAC CATCAAAAAC AACTATACCC GCTTCCTGGT TATTTCTCCC
AACGGAGTAA CACCAGCGCC GGATGCCAAT AAAGCCTCCG TTTACTTCCA GACCTCTCAC
GAGCGCGGAA GTCTGGCAAA GGTGCTGACA CAGGTCGCAC AGGCAGGGAT CAACCTGAGT
AAAATACAGT CCTTCCCAAT GCCTGCTAAA GAATGGAACT ATTACTTCCA CGCGGATTTC
GAATTTGAGA ACCTGAGCCA CTTTGAAAAA AGCATCAGCA AAATTCAGCC GCTGACAGAA
GATCTCAAGG TATTAGGTAT CTATCAGAAG GGAAACACAC ATTAA
 
Protein sequence
MRIAIQGFEG CFHQIAAEAY YGKGIEIECC ASFPELVKKV SKQKDADAGV MAIENSIAGS 
ILPNYSLLKN SGLHVIGEVY LHIRQHLMVL PGQTLEDIRE VHSHHMALLQ CTEFLEKHPH
MKLVETEDTA LSAKHVAQKK LKSTAAIAGK LAADIYGLEI IAPNIHTIKN NYTRFLVISP
NGVTPAPDAN KASVYFQTSH ERGSLAKVLT QVAQAGINLS KIQSFPMPAK EWNYYFHADF
EFENLSHFEK SISKIQPLTE DLKVLGIYQK GNTH