| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1911 |
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| Symbol | |
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| ID | 8358062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2333365 |
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| End bp | 2334435 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964099 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003121608 |
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| Protein GI | 256420955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.743404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG AACTGATTGA AATTGACGAT GAACTGGAGA ACGGCGAAGG CAGCGAGGAG
CTGTACGAGC GGGTGAATAT TATAGCTGAC AAGGGTCAGG AGCCACTGCG TGTGGATAAG
TTCCTGATGA ACCGGGTAGA AGGTGCTACC CGTAACAAAA TTCAGCAGGC ATGTGATAAC
GGCATGGTCA TCGTCAACGA CAAACCAGTT AAATCCAACT ATAAAGTAAA GGCACACGAT
CGTATCGTGG TGTATTCCAA CAAGAATCCG GAAAACACGC AGGTGATACC GGAGGAACTG
CCGCTGAATA TCATATATGA GGATGAAGAC TTAATGATCA TCAACAAGTT ACCCGGCATG
GTGGTACACC CTGGCTGTGG AAACTATACC GGTACCCTGG TAAACGGCCT GGCCTGGTAC
CTGGGTGATC ATACAACAAC TCCAGCGCCG GAACCGAGCA TTCCCCGTTT CGGACTGGTA
CACCGTATCG ATAAGAATAC CAGTGGATTA CTGGTTGTCG CCAAATCTGA GAAAGCCATG
AACGACCTGG CGAAGCAGTT CTTCGACCAT ACCGTACAAC GCCGTTACCT GGCCCTCGTA
TGGGGTGATT TTGAGGAAGA TGAAGGAACG ATTGAAGCGC ACGTTGGCCG TCACCAGCGA
TTCCGTAAGA TCATGGACGC CTATCCTGAG GGAGAATATG GTAAAGAAGC GATCACCCAC
TATAAAGTGC TGGAACGTTT TAACTACGTG ACATTGATCG AATGCCGCCT GGAAACAGGC
CGTACCCACC AGATCAGGGT ACATATGCAG CACATAGGTC ACTCCCTGTT CAATGATGAC
ACTTATAACG GTGACCGTAT TCTGAAAGGC ACCGTATTCG CCAAATACAA ACAATTTGTG
GAAAACTGTT TCGAAATCAT GCCACGCCAT GCCCTGCATG CGCAGACACT TGGTTTCATA
CACCCGCGTA CACGCAAACC TATCCATTTT GAAAGTCCGT TACCTGATGA TTTTAAAGCC
GTTCTTGAGA AATGGAGACG CTATGTGAGC GCCCGACCAT TAGAAGAGTA A
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| Protein sequence | MAEELIEIDD ELENGEGSEE LYERVNIIAD KGQEPLRVDK FLMNRVEGAT RNKIQQACDN
GMVIVNDKPV KSNYKVKAHD RIVVYSNKNP ENTQVIPEEL PLNIIYEDED LMIINKLPGM
VVHPGCGNYT GTLVNGLAWY LGDHTTTPAP EPSIPRFGLV HRIDKNTSGL LVVAKSEKAM
NDLAKQFFDH TVQRRYLALV WGDFEEDEGT IEAHVGRHQR FRKIMDAYPE GEYGKEAITH
YKVLERFNYV TLIECRLETG RTHQIRVHMQ HIGHSLFNDD TYNGDRILKG TVFAKYKQFV
ENCFEIMPRH ALHAQTLGFI HPRTRKPIHF ESPLPDDFKA VLEKWRRYVS ARPLEE
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