| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1907 |
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| Symbol | |
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| ID | 8358058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2329217 |
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| End bp | 2329768 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644964095 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121604 |
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| Protein GI | 256420951 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGAATCCG CGTTCACATA TACGGAATCT GAGCTGGTGC AGGGGCTAAA GGCCAAAGAC
CAGAAGGTAT TCGGCTACCT GTATGACCGA TATTCGCCTG CTTTGTACGG GGTGGCACTT
AAAGTGCTCA ACGACGAAAG CAATGCGAAT GATGTATTGC AGGAAGTGTT CCTTAAAATC
TGGCGTAATA TTGACCGGTA CGATGAAAGC AAAGGACGTC TGTTCACATG GATGCTCAAT
ATTACACGTA ACTCCGCAAT TGATACGCTC CGCTCGAAGG CACATAAAAT GGATCAGAAA
ATCCAAGACA TTGGCGATGA CGTACATTTA TATACAGGTA ATTTAACTGT ACACCCATCC
GTTGACCATC TTGGACTTTC AAAGGTTCTT GAAAAATTAA CTAAGGAACA ACGAATCATC
ATTGATTTAG CGTACTATAA GGGTTGCACC CAGGAAGAAA TTTCCAAGGT GCTGGAAATT
CCTTTGGGTA CCGTAAAAAC AAGGATGAGG AACGCAATCA TTCAATTAAG AAACTTGTTA
AAATTAGTAT AA
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| Protein sequence | MESAFTYTES ELVQGLKAKD QKVFGYLYDR YSPALYGVAL KVLNDESNAN DVLQEVFLKI
WRNIDRYDES KGRLFTWMLN ITRNSAIDTL RSKAHKMDQK IQDIGDDVHL YTGNLTVHPS
VDHLGLSKVL EKLTKEQRII IDLAYYKGCT QEEISKVLEI PLGTVKTRMR NAIIQLRNLL
KLV
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