Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1905 |
Symbol | |
ID | 8358056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2327572 |
End bp | 2328120 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964093 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003121602 |
Protein GI | 256420949 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAGCAG CAGTCACATA TACAGAATCC GAATTGGTAC TTGGCCTCAA GGCGAGGAAC GAAAAGCATT TCGGGTACTT ATATGATCAT TATTCACCGG CATTATATGG TATTGCACTC AAAGTGTTGA ACGATGAGGC GACAGCCGGT GATGTGCTGC AGGAAATTTT TCTCAAGATC TGGCGCGGTA TCGAACGCTA CGATAGCGAA AAGGGACGCC TGTTCACCTG GATGGTGAAT ATAGCCCGTA ATACTGCCAT TGATACCCTC CGCTCAAAGT CTCATAAGAT GGGACAAAAA GTTGCAGAAT TAGGGAGCAA CGTTCTTGCG TCAGACCAGC TGGCTATCCA TCCTTCCGTG GATCACCTCG GATTGGTGAA AGTGTTGGAA CAACTCAGCA AGGAACAACG TGTTATTATA GACCTGGCTT ATTATAAGGG ATGCACTCAG GATGAGATTG CGAAGATATT GGACATCCCT CTTGGAACGG TGAAGACCAG GATGCGTAAT GCGATCATAC AATTGCGGAA TATTTTAAAA CAGATCTAA
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Protein sequence | MGAAVTYTES ELVLGLKARN EKHFGYLYDH YSPALYGIAL KVLNDEATAG DVLQEIFLKI WRGIERYDSE KGRLFTWMVN IARNTAIDTL RSKSHKMGQK VAELGSNVLA SDQLAIHPSV DHLGLVKVLE QLSKEQRVII DLAYYKGCTQ DEIAKILDIP LGTVKTRMRN AIIQLRNILK QI
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