| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1905 |
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| Symbol | |
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| ID | 8358056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2327572 |
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| End bp | 2328120 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964093 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121602 |
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| Protein GI | 256420949 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAGCAG CAGTCACATA TACAGAATCC GAATTGGTAC TTGGCCTCAA GGCGAGGAAC
GAAAAGCATT TCGGGTACTT ATATGATCAT TATTCACCGG CATTATATGG TATTGCACTC
AAAGTGTTGA ACGATGAGGC GACAGCCGGT GATGTGCTGC AGGAAATTTT TCTCAAGATC
TGGCGCGGTA TCGAACGCTA CGATAGCGAA AAGGGACGCC TGTTCACCTG GATGGTGAAT
ATAGCCCGTA ATACTGCCAT TGATACCCTC CGCTCAAAGT CTCATAAGAT GGGACAAAAA
GTTGCAGAAT TAGGGAGCAA CGTTCTTGCG TCAGACCAGC TGGCTATCCA TCCTTCCGTG
GATCACCTCG GATTGGTGAA AGTGTTGGAA CAACTCAGCA AGGAACAACG TGTTATTATA
GACCTGGCTT ATTATAAGGG ATGCACTCAG GATGAGATTG CGAAGATATT GGACATCCCT
CTTGGAACGG TGAAGACCAG GATGCGTAAT GCGATCATAC AATTGCGGAA TATTTTAAAA
CAGATCTAA
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| Protein sequence | MGAAVTYTES ELVLGLKARN EKHFGYLYDH YSPALYGIAL KVLNDEATAG DVLQEIFLKI
WRGIERYDSE KGRLFTWMVN IARNTAIDTL RSKSHKMGQK VAELGSNVLA SDQLAIHPSV
DHLGLVKVLE QLSKEQRVII DLAYYKGCTQ DEIAKILDIP LGTVKTRMRN AIIQLRNILK
QI
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