Gene Cpin_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1895 
Symbol 
ID8358046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2313166 
End bp2313741 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID644964083 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003121592 
Protein GI256420939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC TACTTGTGTG TGTCCTGTTG GCAGGGCTGC TATCCTTACA AGCCACTACG 
ACAAAACTGA TAGCCGGCAC CGGATTTACA ACAGGAGGGA GCCTGAAAGA TTACAACGGA
AAAACGCATA CTATAAAACC CAGAGGAAAA GCAGTTGTAT ACCTGTTTCT TTCACCAGAG
TGTCCGCTGT GTAAAAACTA TGCCCCCGTG TTGCAGGCAA TGCAGCAGAA ATATCCTGAA
ATACAGTTCT ATGGTATCGT GAGCGGAAAA ACGTTCACGA GAGAGATGGT GGCGGAATAT
GCCAAAGACT ACAAAATTAC TTTTCCGATA CTGATGGATC CTGATAAACA TGCAGCTGAA
TCACTGAGAG CAACCGTTAC GCCGGAAGCA CTGCTGATAG GTGAAAATGG AAGAGAATAT
TACAGAGGAC TGATCGATGA TTGGGTAACC GGTCTTGGTA CCAAGCGTGT GAAAGCAACA
AAGCTGTACC TGTCGCTGGC GATTGAAAAC CTCTTGTCAG GAAGCGACCT GACTTATGCT
ACACAGCCAA TTGGTTGTCT TATCAGTAAC TATTAA
 
Protein sequence
MPKLLVCVLL AGLLSLQATT TKLIAGTGFT TGGSLKDYNG KTHTIKPRGK AVVYLFLSPE 
CPLCKNYAPV LQAMQQKYPE IQFYGIVSGK TFTREMVAEY AKDYKITFPI LMDPDKHAAE
SLRATVTPEA LLIGENGREY YRGLIDDWVT GLGTKRVKAT KLYLSLAIEN LLSGSDLTYA
TQPIGCLISN Y