| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1888 |
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| Symbol | |
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| ID | 8358039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2299807 |
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| End bp | 2303268 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964076 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121585 |
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| Protein GI | 256420932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAT CATACTTCTG TAGAGTATGT ATTATTGCCA GCTTCCTGTT AATGACCTCA
TTGACGGAAG TCAGTCCCCT GCGTGCCCAA CAATCTGCCT CCTGCCCGCA ATGTGTCACT
ATTGCCGCCA CTGACAAAAC CCTCGCAGCC GTCATGGCGG AAGTATCCGC ACAAAGCAGA
CTCAATTTCC ATTACGATAA AACAGCCATC GATCTACGGA AGAAAATATC CCTCCATTGT
AAAGACCTTC CCGTCCAGGA AGTACTCGAT AAATTATCTG TTCGTACCGG CTTATCATTC
CTTGTAAAAG GGGATAAGAT CATCGTATGG GCCGGTATGC CGGAAACAAC CGGCGCCAAT
ACAGAAACTG CCGACGGAAA TGAACAGCTG CAGATATCCG GCCGGGTAGA AGACAGTCGC
GGCCGACCCA TTCCCGGGGC TACTATCCTT GTAAAAGATT CTCATAAAGG CGTACATACT
GACGACGAGG GCTACTACAG TATTAAAGCC GCCCCCGCCG ATGTACTGGT ATTCCGATCC
GTAGGATTTA TTAATAAAGA GATCAGTATC AGCGAGCGTC TGCTGATCGA TGTTACCCTC
TCAGAAAGTG TGCAGGGGCT CAATGAGCAG GTAGTGACAG CGCTGGGTAT TCCCAAAAGC
AACAAAGAGC TCCCCTACTC CACCGGTCAG CTGCTTAATG AAGATATCTC CACTGTCAAA
GATGCCAATG TGATTAACAG CCTGTCGGGT AAAATTGCCG GCGTCATGAT CAACAGAAGT
GCATCTGGTA TCGGCGGTTC TGCCCGGGTG ATTTTAAGAG GCAATAAATC TACCCGCGAA
AACCAGCCCC TTTATATTAT CGATGGTGTG CCTATGGCCA ATTTTACGCC TTCACAGCCG
ACGGATATAT GGGGACAATC ATCTGGTATT GTAGGTTCCA GCGGTCGGGA CGGCGGAGAT
GGTATCTCTA ATATCAATCC GGACGATATT GAGAGTATCA GCGTACTGAA AAGCGCTTCG
GCTGCTGCCT TGTATGGTAG TCAGGCCGCC AACGGCGTAA TCATGATCAC TACCAAAAAA
GGACTGGCAG GTAAAGCACG TGTCAATGTA TCATCTGATC TGATGATTGA TAAACCTTTG
CTGCTACCGG ATCTGCAATT CCGCTACGGA CAAACGATCC GTCCTTATAA AGACGACAAA
GACAACCTGC AACCTGGTTC ATCCGACAGC TGGGGCAGTA AGACAACCGC GCGTAATCAT
GTGCAGGACT TCTTCCGTAC TGGTCTGACC TCTACCAATG GGCTTTCCTA CAGTGGCGGA
GCCGCCAATA CACAATATTA TCTGTCATAT GCCAATACGA TGAACAAGGG CATATTACCC
GCTAATAATC TGCAAAGGCA TACTTTCAAT ACACGTATTA CCGCCAATCT GCTCAAAAAG
AAACTACAGG TAGACGCCAA CTTCTCTTAC CTGATACAGG ATGTCCAGAA CAGACCTTCC
TCCGGACTTT ACTACAATCC TCTCACAGGT TTGTACAACC TGCCCAGAGG ACTGGACTTC
AACAACTACA AACAATACCA GTACTTCGAT ACACAACGCA ATCTGCCATT ACAAAACTGG
TGGAATATCC ATAGTGACCT GAACTGGTCC GGACTGGATG ATCAGCAGAA TCCATACTGG
ATACAATACA ACGCACGACG TCATGAAAGC AGGAACCGTG CTATGTTTTC GTTGTCTCTG
AAATATAAAC TGAGGGAATG GCTATCCTTA CAGATCAGGG GAAATGTGGA CAGAAGTTAT
GATCTCTATG AGATGTCAGC ACACGCAGGC ACTCAACAGG TGTTAAGTCC ACCGAATGGC
CGCTACACCC GCGAGGCTGA ACATAACACA CAAGTCTATG GAGATATGAT GCTGACCGCC
AGCCGTCAGT TATCCCCCAG CCTGAAACTG CAAACCATGC TGGGTGTCAG CATCACAGAT
GTGAAAGCAC ATGACCGCTC ACTGGTTAGT ACCAATCCGA CTGCTGCTGA AGGCCTGGTT
ATTCCCAATA TCTTTTCTGT ACAAAATATC TCTCCCAGCG CCCTGGATGC GCAACAGAGT
ATAGATAAAA AGCAATTACA GGCGCTGTTT GGCAGTGCAC AACTGAATTG GAAGCAACGC
ATTTTCCTGG ACCTGACAGG TCGTAATGAC TGGTCAAGCA CCTTTGCCTT TACGCCTATC
AAAAACAAAG GCTATTTCTA TTATTCCGCA GGTGTGAGTT CTGTATTGAG TGAGTGGTTT
ACCTTACCGT CTGCCGTCAG CTTCGCTAAA GCGAGAATAT CTTATGCGAA AGCCGGTAAC
GACATCGCTC CTTATGCATC CCGTCCGGCC CGCTTTCTGT TACAGACGAC CGGTGGTGTC
ACACGTGTCA ACTTCAATAC GCGCGCACCT TATCCAGGTA TTTATCTGAA ACCGGAAGAC
AACCGTTCAC TGGAAGCCGG AGGAGAAATA CGTTTCTTAC AAGACCGTAT CGGCATAGAC
CTCACCTGGT ATAAAAACAA CAACTACCAG CAGTACATGG AGGTACGTGC ACCATCCGGT
TCAGGCTATC TTTTCTATTA CCTGAACCTG GGTAATATCC AGAACCAGGG ATGGGAAGCG
GCAGTCAATC TGGTGCCGAT ACAGCATAAA GACCTGAAGT GGAGCAGTAC TTTCAATCTT
ACCATCAATA ATAACAAGGT GGTAAAGCTT AGCAACAGCA GTATCCCTGG CGCCGGACCA
GACAACTATT ACATATTGAC GGACTTCGTT ACGAACATGT ACGGATCCTT CATTAAGGAA
GGCGGTTCCT GGGGAGATAT CTATACTAAT AAAGAGCTTT ATAAAAACGA GAAAGGACAG
TTTGTAATCG ACAGCAGAGG AAATCTTGAA ACACGCAACG TACTGAAAAA AGTAGGCAAC
CCTAATCCCC GGTTTATGCT CGGATGGAAT AACTCCCTCA GCTACAAGAG TTTTGCACTT
AGTTTTCTGA TAGATGGCCG TTTCGGCGGC AAAGTCATGA GCGTTACCAA TTCTGTATTG
GATGCTTATG GCGTCAGTGA AGCCAGTGCA AAAGCCCGTG ATGCAGGAGG AGTGACTATC
AACGCAGTAT ATGAAAACGG CACCCCGCTT ACGACCCAAT ATGACGAACG CAAATATTAC
GCTACGATCG GAGGAAGAGC AGGCATCGGA GAAATGTATA TGTACGATGC CACAAATATC
AGGCTAAGGG AGATATCACT GACCTGTAAA TTACCGTTAA AGAGCAAATG GATCAACAGA
CTACAGGTCG GTTTGATCGG CAGAAACCTT TGCTTCTTCA GTATCCACGC ACCATTTGAT
CCCGAAGTGT CCATGAGCAG CGGCAATGGA TTACAGGGAA TAGACGCATT TGGTGTATCG
GCACTGAGAA GCATGGGCGC CAACATTAAA CTGGTTCTTT AA
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| Protein sequence | MGESYFCRVC IIASFLLMTS LTEVSPLRAQ QSASCPQCVT IAATDKTLAA VMAEVSAQSR
LNFHYDKTAI DLRKKISLHC KDLPVQEVLD KLSVRTGLSF LVKGDKIIVW AGMPETTGAN
TETADGNEQL QISGRVEDSR GRPIPGATIL VKDSHKGVHT DDEGYYSIKA APADVLVFRS
VGFINKEISI SERLLIDVTL SESVQGLNEQ VVTALGIPKS NKELPYSTGQ LLNEDISTVK
DANVINSLSG KIAGVMINRS ASGIGGSARV ILRGNKSTRE NQPLYIIDGV PMANFTPSQP
TDIWGQSSGI VGSSGRDGGD GISNINPDDI ESISVLKSAS AAALYGSQAA NGVIMITTKK
GLAGKARVNV SSDLMIDKPL LLPDLQFRYG QTIRPYKDDK DNLQPGSSDS WGSKTTARNH
VQDFFRTGLT STNGLSYSGG AANTQYYLSY ANTMNKGILP ANNLQRHTFN TRITANLLKK
KLQVDANFSY LIQDVQNRPS SGLYYNPLTG LYNLPRGLDF NNYKQYQYFD TQRNLPLQNW
WNIHSDLNWS GLDDQQNPYW IQYNARRHES RNRAMFSLSL KYKLREWLSL QIRGNVDRSY
DLYEMSAHAG TQQVLSPPNG RYTREAEHNT QVYGDMMLTA SRQLSPSLKL QTMLGVSITD
VKAHDRSLVS TNPTAAEGLV IPNIFSVQNI SPSALDAQQS IDKKQLQALF GSAQLNWKQR
IFLDLTGRND WSSTFAFTPI KNKGYFYYSA GVSSVLSEWF TLPSAVSFAK ARISYAKAGN
DIAPYASRPA RFLLQTTGGV TRVNFNTRAP YPGIYLKPED NRSLEAGGEI RFLQDRIGID
LTWYKNNNYQ QYMEVRAPSG SGYLFYYLNL GNIQNQGWEA AVNLVPIQHK DLKWSSTFNL
TINNNKVVKL SNSSIPGAGP DNYYILTDFV TNMYGSFIKE GGSWGDIYTN KELYKNEKGQ
FVIDSRGNLE TRNVLKKVGN PNPRFMLGWN NSLSYKSFAL SFLIDGRFGG KVMSVTNSVL
DAYGVSEASA KARDAGGVTI NAVYENGTPL TTQYDERKYY ATIGGRAGIG EMYMYDATNI
RLREISLTCK LPLKSKWINR LQVGLIGRNL CFFSIHAPFD PEVSMSSGNG LQGIDAFGVS
ALRSMGANIK LVL
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