Gene Cpin_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1883 
Symbol 
ID8358034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2289953 
End bp2290762 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content44% 
IMG OID644964071 
Productputative esterase 
Protein accessionYP_003121580 
Protein GI256420927 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATG TATTAGGGGT TATGTTGTTA TTGCTTGGCT TTACGGGCAC AAAAGCGGCC 
CAGGTAGATA CAATAGCGAT CTATAGCAAG GCAATGCACA AAAGTCTGAA ATGTGTGGTG
GTCACACCTG ATAGCTATAA AGACAAACAG GAGCATTATC CGGTTGTATA TATCCTTCAC
GGGTACAGTG GTAATTATGC AGACTATGTC AAAAAGATCC CGGGTCTTGC CGCTGTTGCT
GACACGTATC AGCTGATAAT GGTCTTCCCG GACGGCGGCT TCAGTAGCTG GTACCTGGAT
AGTCCGCTGG ATAGCGGTGT ACGTTTTGAA ACATATGTAG GTAAAGAGAT TCCTTCCTTT
ATCGATCAGC ATTATCGTAC GAAAACTGAC CGCCAGCACC GCGCCATTAC AGGACTGAGT
ATGGGAGGGC ATGGTGCATT GTACCTCGCT ATCCGTCACC AGGAGACTTT TGGTGCGGCA
GGTAGTATGA GCGGTGGGGT AGATTTTCGT CCTTTCCCTA ATAACTGGGA TATTGCAAAA
AGGCTGGGGA CTTTGAAAGA TAATGCGGCT AACTGGGATA AAAACGTAGT AGTCAATCAG
CTCCCTGATC TGAAGAATGA TTCATTGTCA CTGATCATCG ATTGTGGTGT AAAAGACTTT
TTTATAGATG TGAATCGTCA GCTGCATCAG CGTCTGCTGG AACAAGGTAT ATCACATGAT
TATATCGAAA GACAAGGAGA GCATAACTGG GAATACTGGA GCAATTCGAT TATGTACCAG
TTGTTATTTT TTCACCGGTA TTTCAAATAA
 
Protein sequence
MKYVLGVMLL LLGFTGTKAA QVDTIAIYSK AMHKSLKCVV VTPDSYKDKQ EHYPVVYILH 
GYSGNYADYV KKIPGLAAVA DTYQLIMVFP DGGFSSWYLD SPLDSGVRFE TYVGKEIPSF
IDQHYRTKTD RQHRAITGLS MGGHGALYLA IRHQETFGAA GSMSGGVDFR PFPNNWDIAK
RLGTLKDNAA NWDKNVVVNQ LPDLKNDSLS LIIDCGVKDF FIDVNRQLHQ RLLEQGISHD
YIERQGEHNW EYWSNSIMYQ LLFFHRYFK