Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1872 |
Symbol | |
ID | 8358023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2275154 |
End bp | 2276359 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964060 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003121569 |
Protein GI | 256420916 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.803329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA CGACAAAATA TAACGATCAG TTCACTGCCC GGAAAGCAGC CGTACTGGTG CCGACCTACA ACAATGCCAA AACGCTGGAA TCCGTTATAA GAGACGTACT TTCTTATACT TCCCATGTCA TTGTCGTAAA TGATGGTAGT ACCGACGAAA CTGCCGATAT CCTGGATAGA TTTCCTCAGA TACAGCGTGT GGAATATACG CCTAACAGAG GAAAGGGGAT CGCTTTGCGC CGTGGTTTCC GCTACGCTGT TGAGCAGGGA TATGATTATG TGATCACGAT AGATGCCGAC GGACAGCATT TCGCGTCTGA TCTGCCGGTT ATGCTGGAGA AACTGGAAAC AGAGCAGAAG GCAATTGTGA TCGGCGCGCG TAATCTGCAA CAGGAAAACA TGCCGGGTAA GAATACCTTC GCTAATAAAT TTTCTAACTT CTGGTTCTAT GTGGAAACAG GACTGAAAGG ACCGGATACA CAATCCGGCT ATCGCCTGTA TCCGGTGTAT GCTATGCGCA AGATGCGCTT CTGGTGTACC AAATATGAGT TCGAAATAGA GGTGCTGGTG AGAAGTGCCT GGAAAGGTAT TAAAATTGAC TGGGCGCCGA TAAAAGTATA CTATCCGCCT GCGGAAGAAA GGGTTTCTCA TTTCCGCCCC TTCCGGGATT TCTCCCGTAT CAGTGTGTTG AATACGGTAC TGGTAACAAT TGCTTTTCTT TACATCAAAC CGAGGGATTT CTTCCGTTAT CTGATGAAGG CGGAGAACTG GCGAAGTATG TGGTACGACC ATGTACTGAA CAAGGAAGAG TCTAATTTCA GAAAAGCCAT ATCCATCGGC TTTGGCGTAT TTATGGGTAT TGTACCTATC TGGGGTTTCC AGATGGTAAC GGCGATGGCG CTGGCGGTGT TGTTCCGGCT GAACAAGGCG TTGGTATTTA TGTCCTGTCA TGTGAGTCTG CCGCCGATGA TCCCGTTTGT GATCTTCGCC AGTTTTGCCA CCGGCAGACT ATGGGTGAAG GATGGGAGTT TGTTGCTGCC TTTCAGCACG AATTTATCAC TGGACATCAT CAAACAGAAT TTATTTCAAT ATTTAACAGG AGCCTGTACG CTGGCAGTAG CCGCCGGTGT TTTGGTGACA CTGATCGTAT ATGTGCTGCT GGCCATTTTC CGAAACGATC CGGCCAGACA GCGACAGGTA CGTTAG
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Protein sequence | MTDTTKYNDQ FTARKAAVLV PTYNNAKTLE SVIRDVLSYT SHVIVVNDGS TDETADILDR FPQIQRVEYT PNRGKGIALR RGFRYAVEQG YDYVITIDAD GQHFASDLPV MLEKLETEQK AIVIGARNLQ QENMPGKNTF ANKFSNFWFY VETGLKGPDT QSGYRLYPVY AMRKMRFWCT KYEFEIEVLV RSAWKGIKID WAPIKVYYPP AEERVSHFRP FRDFSRISVL NTVLVTIAFL YIKPRDFFRY LMKAENWRSM WYDHVLNKEE SNFRKAISIG FGVFMGIVPI WGFQMVTAMA LAVLFRLNKA LVFMSCHVSL PPMIPFVIFA SFATGRLWVK DGSLLLPFST NLSLDIIKQN LFQYLTGACT LAVAAGVLVT LIVYVLLAIF RNDPARQRQV R
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