Gene Cpin_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1863 
Symbol 
ID8358014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2268368 
End bp2269615 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content47% 
IMG OID644964051 
Producttryptophan halogenase 
Protein accessionYP_003121560 
Protein GI256420907 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG AAAAGGTAGA CGTATTAGTG ATCGGTGCAG GTCCTGCAGG ATCCGTGGCG 
GCATCCATTA TTCATCAGGC GGGTTACTCC GTGAAGATTG TGGAAAAACT GAAATTTCCG
CGTTTTGTGA TCGGAGAAAG TCTTTTGCCT CGCAGTATGG AAGCGCTGGA AGAAGCAAAA
TTCATCGATG CGATTAAGGC GAAGGGCTTC CAGGAGAAGT TTGGCGCCAA GTTCGTAAAA
GGTGATAAAG TTTGTGACTT TACCTTCAAA GAACAGCATA CTGAAGGTTG GAACTGGACC
TGGCAGGTGA CAAGGGCTGA TTTTGATAAG ACCCTGGCGG ATACCGTAGC ATCAATGGGT
GTGCCTGTGT CTTACGAAAC GACTGTGACT GATATCCAAT TCAACGGATC AGATTCTGTG
ACGACTGTAG AAGATATAAA AGGGAATAAA AGCCAGATAG AAGCACGTTT TATTGTAGAC
GGCAGCGGCT ATGGCAGGGT GATTCCCCGC CTGTTCAACC TGGAGAAAAA TTCCGTACTA
CAACCGCGTA AAGCGCTGTT TGCACACACA GTAGATGAAC GTCGTTCCAT GGCGGATGAA
CCAAACCGCA TTACAGCGGT CGTACATCAG CCAGGTACCT GGATCTGGAT CATTCCGTTC
TCAACAGGGG TTACCTCTGT AGGTTTCGTG GGCGATCCGT CTTTCTTTGA CAGCTTCCCG
GGTACACAGG AGGAAAAATA CAGGGCGATG CTGGAATCAG AACCATTTAC CAGAGAGCGT
TTCCGCGATG TGGAATTTGT GTTTGAACCA CGCGTACTGG AATCCTGGTC AGCCACTACT
GATAAATTCT ATGGCGACGG ATTTGTACTG ACCGGTAACG TAACAGAATT TCTGGATCCT
ATTTTCTCTT CCGGCGTAAC TTTGGCCTGT GTTTCCTCGC AGACAGCAGC GAAACTGGTG
ATCCGCAAAC TGAAAGGAGA AGTGGTAGAC TGGGAAAAAG AATACATGGA GCCAACCATG
CAGGGCGTGA ATACTTTCCG TTCTTATGTA ATGGCCTGGT ATGACGGTAC GCTGGATAAG
ATCTTTTTCT CTGCTGAGAA ACGTCCGGAT GTAAAGAATC AGATCTGCTC TGTACTGGCG
GGATATGTAT GGGACATGAG CAATCCTTAT GTGCAGAACC ACGATACTGC ACTGAAGCGA
CTTGCACGTA CCATCGAATT AACAGAAATC TTAAAACAGG ACAAGTAG
 
Protein sequence
MTTEKVDVLV IGAGPAGSVA ASIIHQAGYS VKIVEKLKFP RFVIGESLLP RSMEALEEAK 
FIDAIKAKGF QEKFGAKFVK GDKVCDFTFK EQHTEGWNWT WQVTRADFDK TLADTVASMG
VPVSYETTVT DIQFNGSDSV TTVEDIKGNK SQIEARFIVD GSGYGRVIPR LFNLEKNSVL
QPRKALFAHT VDERRSMADE PNRITAVVHQ PGTWIWIIPF STGVTSVGFV GDPSFFDSFP
GTQEEKYRAM LESEPFTRER FRDVEFVFEP RVLESWSATT DKFYGDGFVL TGNVTEFLDP
IFSSGVTLAC VSSQTAAKLV IRKLKGEVVD WEKEYMEPTM QGVNTFRSYV MAWYDGTLDK
IFFSAEKRPD VKNQICSVLA GYVWDMSNPY VQNHDTALKR LARTIELTEI LKQDK