| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1862 |
|---|
| Symbol | |
|---|
| ID | 8358013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2267278 |
|---|
| End bp | 2268345 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964050 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003121559 |
|---|
| Protein GI | 256420906 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTT TTACTAAAGA GACGAAAACA GCACTACAGG CGCAGGAAGC AGCTTTAAGA
CTGGCCTTCG CACCAATAGC ATTTCAGGCC ACCCGCGCAT TACGTGATAT GGGCATCCTG
CAGGCTGTTA GTGACGCCGG ACAAACCGGG CTGACCATCG AAGAGGTCCT TGAAAAAGTA
TCCATGTCCC GTTATGCTGT ACGCGTATTG CTGGAAGCTG GTCTGGGTAT CGAACTGCTG
ATCATCAAAG ACAAAAAATA CATTCTGACC AAGACGGGTT ATTTTATCCT GCATGACAGA
CTGACCCGCA TCAACATGGA CTTTTCCCAG GATATCTGCT ATCTCGGTAT GAATCATCTG
CAGGAAAGTC TGACGGAAGG AAAACCCGCA GGACTGAAGG AACTCGGTCC GTGGGATACC
ATCTATCCGG GATTACCATT GCTGCCTCCT GAAATAGGAA AAAGCTGGTT CGACTTTGAT
CACTATTATT CCGATCTGGC ATTTCCGCAG GCATTGCCGA TCGTATTTGA AAATAAACCC
CGCAGACTCC TGGACATCGG TGGTAACACA GGTAAATGGA CATTGGCCTG CACTGCCTAT
GACAAGGATG TACAGGTAAC TATGTTTGAC CTGCCTGGTG AGATCGCCAT TGCCGCACAA
CGGGCAAAAG ACGCCGGCGT AGCCGACCGC GTTTCTTTCC ATGAAGCGAA TATCCTGGAT
GAAAGCCTGC CTTTCCCGTC CGGATTTGAC GCTATCTGGA TGAGTCAGTT CCTGGACTGC
TTCTCGGAAG AGCAGATCGT ATCTATCCTG AAACGTTGCG GAGATGCACT GACTGAGACA
GGTACTATCT ATATCCTGGA GCCTTTCTGG AACAGACAGC GTTTTAAGGC AGCAGCTTTT
TCCCTGCAGC AAACTTCGCT CTACTTTACC GCAATGGCTA ACGGTAACAG TCAGATGTAC
CATACCGACG ATTTCTTCAA ATGTATTGAC GATGCAGGAT TGCAGATCAT AGAGGAAAAC
AACGAGATGG GGCTCAGCTA TACACTGCTG AAGTGTAAGA AAAAATAA
|
|---|
| Protein sequence | MEFFTKETKT ALQAQEAALR LAFAPIAFQA TRALRDMGIL QAVSDAGQTG LTIEEVLEKV
SMSRYAVRVL LEAGLGIELL IIKDKKYILT KTGYFILHDR LTRINMDFSQ DICYLGMNHL
QESLTEGKPA GLKELGPWDT IYPGLPLLPP EIGKSWFDFD HYYSDLAFPQ ALPIVFENKP
RRLLDIGGNT GKWTLACTAY DKDVQVTMFD LPGEIAIAAQ RAKDAGVADR VSFHEANILD
ESLPFPSGFD AIWMSQFLDC FSEEQIVSIL KRCGDALTET GTIYILEPFW NRQRFKAAAF
SLQQTSLYFT AMANGNSQMY HTDDFFKCID DAGLQIIEEN NEMGLSYTLL KCKKK
|
|---|
| |