| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1858 |
|---|
| Symbol | |
|---|
| ID | 8358009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2264509 |
|---|
| End bp | 2264928 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964046 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121555 |
|---|
| Protein GI | 256420902 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCATCC ACACCGACAA CATTACAGCA TACATTCCAC AGCGTCCGCC AATCGTAATG
ATCAGCGGCA TACTGGAAGT AAAGGATGCC CTTACCCGTA CCGGCCTGCA GATTGCGGCC
GATAATATTT TTGTGGAAAA TGGCGTGCTG CAATCACCCG GACTATTGGA GAACATGGCT
CAGACCGCCG CTGCCCGTGT CGGATATATC GCTCAACAGG AAAATACGCC TGTTCCGATC
GGTTTTATCG GCGCGGTAAA GGATTTTGAA GTATTCGGAT TTCCACCGGT AGGTTCCTTT
ATTGAAACCA CTACCGAAAT ACAAACCCAG GTGTTTAATG CTACTATGGT AGCGGCTAAA
GTGACCCTGG ACGGGAAGTT AATGGCACAA TGTGAGCTAA AAATTTTCAT AAACCCATAA
|
|---|
| Protein sequence | MFIHTDNITA YIPQRPPIVM ISGILEVKDA LTRTGLQIAA DNIFVENGVL QSPGLLENMA
QTAAARVGYI AQQENTPVPI GFIGAVKDFE VFGFPPVGSF IETTTEIQTQ VFNATMVAAK
VTLDGKLMAQ CELKIFINP
|
|---|
| |