Gene Cpin_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1856 
Symbol 
ID8358007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2263354 
End bp2263611 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content38% 
IMG OID644964044 
Productphosphopantetheine-binding protein 
Protein accessionYP_003121553 
Protein GI256420900 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC AAGAAATCAT AAAAATCACG AATGCATTCC TGGTAGAGGA ATTTGAAGCG 
GATGGGGACA AGATTATGCC TGATGCCAAT CTTAAAGCTA CCCTTGATCT GGATAGCCTT
GACTATATTG ATCTGGTGGT AGTTATTGAA AACAATTTTG GATTTAAAGT AAATCCGGAA
GATTTCCAGA GTATAGCCAC ATTCCAGAAC TTTTATGACT ACGTGGCTGA TCGTATCAAA
CAAAAGGAAC TGGTATAA
 
Protein sequence
MDKQEIIKIT NAFLVEEFEA DGDKIMPDAN LKATLDLDSL DYIDLVVVIE NNFGFKVNPE 
DFQSIATFQN FYDYVADRIK QKELV