| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1854 |
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| Symbol | |
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| ID | 8358005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2261057 |
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| End bp | 2261785 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964042 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003121551 |
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| Protein GI | 256420898 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATGTG CTTTAATAAC AGGTGGCTCC AGAGGAATAG GAAGGGCAAT ATGCGTGAAG
ATGGCGGAGT TGGGGTACTA TGTACTGATC AACTATAAAG GAAATGAAGC TGCTGCTAAC
GAAACACTGG AAGCTGTAAG AGCGAAAGGA AGCGATGGTG AACTGCTGCA ATTCAATGTG
GGCGACAACG AGGAAGTAGT GGCGGTCTTA GGTGGCTGGA TAGAAAATAA TAAAGAAAAA
CAGATTGAGG TACTGGTGAA TAACGCCGGT ATCCGTGAAG ATAACCTGCT GTTCTGGATG
AATGCAGAGC AGTGGAGAAA TGTGCTGAAC ATCAGCCTGG ATGGTTTCTT CAACGTTACC
AAACAGGTTG TGAACAACAT GTTGATGAAG CGTTATGGAC GTATTATCAA TATCGTATCA
CTTTCGGGTA TCAAAGGGCT GCCTGGTCAG ACCAACTACT CCGCAGCAAA AGCGGGTGTG
ATCGGGGCTA CGAAAGCGTT GGCGCAGGAA GTCGCTAAAC GCGGCGTGAC CGTTAATGCA
GTGGCGCCTG GTTTTATCAA AACGGATATG ACCGCCGAAC TGAATGAAAA AGAACTGGCA
GCGCAGGTAC CGATGAACCG TTTCGGTACG CCGGAAGAAG TAGCAGAAGC TGTTGCGTTC
TTTGCCTCGA AAGCATCTTC TTATATAACA GGAGAGGTGT TATCGATTAA CGGAGGACTT
TATACTTGA
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| Protein sequence | MKCALITGGS RGIGRAICVK MAELGYYVLI NYKGNEAAAN ETLEAVRAKG SDGELLQFNV
GDNEEVVAVL GGWIENNKEK QIEVLVNNAG IREDNLLFWM NAEQWRNVLN ISLDGFFNVT
KQVVNNMLMK RYGRIINIVS LSGIKGLPGQ TNYSAAKAGV IGATKALAQE VAKRGVTVNA
VAPGFIKTDM TAELNEKELA AQVPMNRFGT PEEVAEAVAF FASKASSYIT GEVLSINGGL
YT
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