Gene Cpin_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1850 
Symbol 
ID8358001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2256698 
End bp2257276 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID644964038 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003121547 
Protein GI256420894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.648821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA GACTGCTTAG ACTGGATTAC AAACTATTTT TTCATATTAA CAATGTATGG 
CAGCATCCTG TACTGGACGC TATCATACCC TGGCTACGGG AACCTTATGT ATGGGCGCCG
CTCTATCTGT TCCTGTTGCT GTTTGTAACG ATCAACTATG GATGGAAAGG GTTCTGGTGG
ATCGTATTTT TCCTGATCAC TTTCGGTCTG GCAGACCAGT CCAGCTTGTT TATCAAGGAT
GCGGTGGGCA GGTTAAGACC TTGTCGCGAT CCTCTGATGC AGCATTTTGT AAGAGTACTG
GTGGTATACT GTCCGGGCAG TGGTAGTTTT ACCTCTTCCC ATGCTGCCAA TCACTTTGCA
GTAGGCACTT TTTGTTTCTT CACTTTCAGG CAGATCTCTA AATGGTTTGC CGCTATGTTT
TTTGTCTGGG CCGCAGTAAT CTGTTATGCA CAGGTCTATG TAGGCGTTCA TTACCCCTTG
GATGTGTTAG GCGGAGGCCT GCTGGGACTC TTCCTTGGAA GCATGAGTGG CAGTTTTTTC
CAACGGCGTA TCAGACTGGA ACCTGAATTA GCAACATGA
 
Protein sequence
MLERLLRLDY KLFFHINNVW QHPVLDAIIP WLREPYVWAP LYLFLLLFVT INYGWKGFWW 
IVFFLITFGL ADQSSLFIKD AVGRLRPCRD PLMQHFVRVL VVYCPGSGSF TSSHAANHFA
VGTFCFFTFR QISKWFAAMF FVWAAVICYA QVYVGVHYPL DVLGGGLLGL FLGSMSGSFF
QRRIRLEPEL AT