Gene Cpin_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1848 
Symbol 
ID8357999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2253967 
End bp2255904 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content46% 
IMG OID644964036 
Productsulfatase 
Protein accessionYP_003121545 
Protein GI256420892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTTT TCCGCCTGGT CTTCTTTCTT TTCTTCTTTA AGACTACTGT TACAGGCAAC 
GCACCTATCC TGAAAGCCTG GAGTCTGGGG TTAAAGTTCG ATATGCGACT TGCCCTGATC
CTGGGGGTAC CTATCTTACT CACCGCTTTT ATTGCCCGGA ACCATTTTTT CACCAAAGCA
GCCATCCGCA GACCCCTGTT TGTATACCTT TTCATTGTAT ACCTGGTCCT GACCCTGGGG
TACGTGTTTG ACCTGGGGCA TTACGCTTAC CTGGGATTAC GCATGGATCC GACTGTTACG
CGTTTTCTGG CTTATGGTGA ACGTGCAGAC AATGCACGGA TGTTATGGCA GAGCTACCCC
GTGATTCGTA CCCTGATCGG CATTGGTTTA TTCCTTTTCC TGATCACCAT ACAGTTTACC
CGTTCCTACT ACCGGATGGG AAAAGAACCG GCGGTAAAGC TGGGAAACTG GAAATATACG
GGTTGGCTGG CATCTATGGT GATCCTGTTT GCGGCAGGTA TCTATGCCAA TGTTGCTTAT
TTCCCGCTCC GTTGGAGTCA GGCGATGTTT ACCAAGGATA ACGGTGTCAC CAGTCTGTCC
CTGAATCCGA TATTATATTA TATATCCAAT ATGTCCGTAC AAAAGGACAC TTACGATATT
CCCAAGACGA AGGAGTACTA TCCAGTCATA GCGGATTATC TGAAGATAGA CCAGCCCAAT
GTGGATAAAC TGGATTTTGT ACGGAACATA CCTGGCAGAG AGGGTAAAAA AATGAACGTG
GTACTGGTTA TGCTGGAATC GACCGGCGCA GCTATCACGA GTATGTATAA TAACCCGATG
ATGCCGACGC CTAATATGAA ACAACTGGCG GACAGCGGTA TTCTTTTCAA TAATTTCTTT
GTACCTGCCA TCAGTACGGC CAGAACCGTG TACGGGGTAA CAACGGGACT GCCGGATATC
ACCCTGACCA AAACAGCTTC CCGTCATCCG CAGATGGTTG ATCAGCGGGT GGTAATGGAC
CAGTTTCAGG GGTATGAAAA GCTGTATCTG CTGGGGGGAA ATACGAACTG GGCAAACATC
AGGGCGGTAT TTACCAACAA TGTTGAAGGC ATTAAGATCT TTGAGGAAGG CTATTATAAG
GCGCCTAAGG CAGACGTCTG GGGCGTATCT GACTTTGACC TCATCACAGA AGCAGACGAG
ATCTTCCGGG ATGCGAATAT ACGGCAAAAG CCTTTTGTCG CATTTCTTCA GCTGGCGGAC
AATCACCCGC CATATACCAC TACAAAAGGA AGGGGCGATT TTAAGAAGGT GACGGAGAAG
GACATTGACA TGGAGAAATT CAAAAAGGCC GGTTTTGTGT CGATGGAACA GTTTAATGCT
ATCCGTTATG AGGACTATAA TGTGGGGCAT CTGATGGAAC TGGCAAAGCA AGGCGGTTAC
CTGGACAATA CTATTTTTAT CATGTTCGGC GACCATAACT GTACGCTCAA TCCGTATCAT
TTTATGCCGA CGCCGGAGTA TGAACTGATC AGTGGAGGCG TACATGCAGC CTGCTTTATT
TACTGTCCGG CCCTGGTGAA ACCACAGGTA GTAAACTATG CGGTTAGCCT GGTGGATATT
TATCCCACAA TGGCAAAACT GGCAGGGATA CCGTTTAAAA ACTATACCCT CGGACAGGAT
ATGCTGGATA CTACCCTTAC CAGCCGTTAT GCTTTTGCTA CTTATCTAAA AAATCTGCAA
ACGCATATTT CACTGATCGG CCAGCGCTAT CAGTATGAAA TTAATACCTA CACGCAGAAA
TCTTACCTGT ATGATATGCA GGGAGATCCG CTGAAAGATG TGAAACAACA AAATCCGGAT
ACTGCCAAAG CACTCGATAA TTTAACGCGG GCTTTTTACG AAAGCACCCG ATATTTGATG
TTTAACAATA AAAAATAG
 
Protein sequence
MVVFRLVFFL FFFKTTVTGN APILKAWSLG LKFDMRLALI LGVPILLTAF IARNHFFTKA 
AIRRPLFVYL FIVYLVLTLG YVFDLGHYAY LGLRMDPTVT RFLAYGERAD NARMLWQSYP
VIRTLIGIGL FLFLITIQFT RSYYRMGKEP AVKLGNWKYT GWLASMVILF AAGIYANVAY
FPLRWSQAMF TKDNGVTSLS LNPILYYISN MSVQKDTYDI PKTKEYYPVI ADYLKIDQPN
VDKLDFVRNI PGREGKKMNV VLVMLESTGA AITSMYNNPM MPTPNMKQLA DSGILFNNFF
VPAISTARTV YGVTTGLPDI TLTKTASRHP QMVDQRVVMD QFQGYEKLYL LGGNTNWANI
RAVFTNNVEG IKIFEEGYYK APKADVWGVS DFDLITEADE IFRDANIRQK PFVAFLQLAD
NHPPYTTTKG RGDFKKVTEK DIDMEKFKKA GFVSMEQFNA IRYEDYNVGH LMELAKQGGY
LDNTIFIMFG DHNCTLNPYH FMPTPEYELI SGGVHAACFI YCPALVKPQV VNYAVSLVDI
YPTMAKLAGI PFKNYTLGQD MLDTTLTSRY AFATYLKNLQ THISLIGQRY QYEINTYTQK
SYLYDMQGDP LKDVKQQNPD TAKALDNLTR AFYESTRYLM FNNKK