Gene Cpin_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1842 
Symbol 
ID8357993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2247923 
End bp2248294 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content48% 
IMG OID644964030 
Producthypothetical protein 
Protein accessionYP_003121539 
Protein GI256420886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.849458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA AGAGGTCTTT TCTGATCGCT TCACTGGTTG CCGGACTGGC TTTTACAGCC 
TGCCAGCAAA AACAGACAGA ACGAACTGAA CATACTCAAG ATACAGCTAC TACCGCAGTG
CATGACAGCA TTGCGGTAGT AACGTTTCAG CTGGACAAAG GGGGATGGGG CTATAAGATC
AACAAAGGCA CTCATACCTA CATTGAACAG CCATTCATCC CCGTAATAGT TGGCAATAAG
CCCTTCCAAA ATGAAGAGGA CGCCAGGAAA GTGGGAGAAA ATATTGCCGC CAAGCTCAGG
AAAAACCCTG GCGGACTGCC AGATTTAACC CGGCAGGAGC TGCTTGATAT GAAAATAGCC
GGTGTAGAGT AG
 
Protein sequence
MTNKRSFLIA SLVAGLAFTA CQQKQTERTE HTQDTATTAV HDSIAVVTFQ LDKGGWGYKI 
NKGTHTYIEQ PFIPVIVGNK PFQNEEDARK VGENIAAKLR KNPGGLPDLT RQELLDMKIA
GVE