| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1835 |
|---|
| Symbol | |
|---|
| ID | 8357986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2239343 |
|---|
| End bp | 2239699 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964023 |
|---|
| Product | transcriptional repressor, CopY family |
|---|
| Protein accession | YP_003121532 |
|---|
| Protein GI | 256420879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3682] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TAACGCAGCA GGAGGAAATC GCCATGCTGG CAATATGGAA AACGGGCACA
GGATCAGTAA AGGATTTTCT GGAGCAGCAT CCGTCTCCAC AACCTCCTTA TACGACGCTT
GCCTCCACGA TCAGGAACCT GGAGAAAAAG GGGTATCTGA CCAGTCGTAA AACAGGCAAT
GTATATGAGT ATACGCCTGC GATCGTTGAA TCTGAGTACA AGCAGAAGTT TATGAGCGGT
TTTGTAAAAG ACTACTTCGA GGATTCATAT AAAGCCCTGG TGACTTTCTT CGCGAAAGAG
AAGAAAATCA CCCCTGAAGA ACTGAAAGAA ATTGTCAGGA TGATCGAGAA AAACTGA
|
|---|
| Protein sequence | MEKLTQQEEI AMLAIWKTGT GSVKDFLEQH PSPQPPYTTL ASTIRNLEKK GYLTSRKTGN
VYEYTPAIVE SEYKQKFMSG FVKDYFEDSY KALVTFFAKE KKITPEELKE IVRMIEKN
|
|---|
| |