Gene Cpin_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1832 
Symbol 
ID8357983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2236222 
End bp2236830 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content47% 
IMG OID644964020 
Productphosphoribosyl-ATP diphosphatase 
Protein accessionYP_003121529 
Protein GI256420876 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATA ACAAACAGAT CAACTTTCAG AAATGCGCCG ACGGTCTGGT GCCGGCTATC 
GTTCAGGATG CGGCTACCTC CAAGGTGCTG ATGCTGGGAT ATATGAACCA GGAAGCCCTG
GACAAAACCT TACAGGAGGG CAAGGTAACT TTCTTTAGCC GTTCCAAGCA GCGTCTGTGG
ACAAAAGGAG AGGAAAGTGG TAATTTCCTG ACCCTGCAGG AAATCAGGGT AGACTGTGAC
AGCGATACGC TGCTGATCAA GGCAATTCCT GCCGGCGTAG TATGTCACAC CGGTGCAGAT
ACCTGCTGGG AAGAGAGCAA TGTCAGCAAT GATTTCCTGG CTAAGCTGGA AAGTATCATT
ACTGACAGGA AGAATAACCC TGCTGACAAG TCCTATACTT CCTCCCTGTT TGCAAAAGGG
ATCAATAAAA TTGCCCAGAA AGTAGGGGAA GAAGCGGTGG AAGTCGTTAT AGAAGCGAAA
GATGATAACG AAGAGCTTTT CCTGAACGAG TCAGCTGACC TGCTGTTTCA TTACCTGGTA
CTGTTAAGTG CCAAAGGTTA TCAGCTGTCA GATGTGCTGG CTGTGCTGCA GAAAAGGCAT
ACTAAATAG
 
Protein sequence
MYNNKQINFQ KCADGLVPAI VQDAATSKVL MLGYMNQEAL DKTLQEGKVT FFSRSKQRLW 
TKGEESGNFL TLQEIRVDCD SDTLLIKAIP AGVVCHTGAD TCWEESNVSN DFLAKLESII
TDRKNNPADK SYTSSLFAKG INKIAQKVGE EAVEVVIEAK DDNEELFLNE SADLLFHYLV
LLSAKGYQLS DVLAVLQKRH TK