Gene Cpin_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1826 
Symbol 
ID8357977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2230778 
End bp2231413 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID644964014 
ProductPhosphoribosylanthranilate isomerase 
Protein accessionYP_003121523 
Protein GI256420870 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AGGTCTGCGG TATCACCCGG AAAGAAGACC TGCAAAGACT GGTCGAATAC 
CAGGTGCATT ATGCCGGTTT AATATTTTAC GAAAAGTCTC CCCGCTTTGC AGCGCCGAAG
ATAGATGGAC GCACTGTAAG GGAGATAGCT GGTATCAAAA AAGTAGGTGT GTTTGTAAAC
GCGTTGCTTG AACAGGTACA ACGTACGATA CTTGATTACG GGCTGGATAT GGTGCAGTTG
CACGGTGATG AAACGCCTGC TTTCTGTGCT GCTATCCGTG AACAGGTACA GGTGATCAAA
GCTTTCAGAT TAGGGGAGGA CGTTAACTGG TCAGCGCTAT TGGCCGCATA TATACCGGTG
ACAGATTATT TCCTGTTTGA TACAGAAGCG GGTAAGGCTT ATGGCGGTAC CGGCAAACGT
TTCAACTGGG AATTACTACA GACATATCCA TATACGCATC CTTTTTATCT GAGTGGAGGT
ATCGGGCTGG ACGAAACACC TGAACTGCTG GAATTACAGC TGCCGGCTTT ATTCGCAGTA
GATGTGAACA GCAGATTTGA GGACCGGCCG GGTGTGAAGA ACATGGAAAA GGTGCGCTTA
TTTACAGATC AGATTCAATC AACTTATTTA AAATAA
 
Protein sequence
MKIKVCGITR KEDLQRLVEY QVHYAGLIFY EKSPRFAAPK IDGRTVREIA GIKKVGVFVN 
ALLEQVQRTI LDYGLDMVQL HGDETPAFCA AIREQVQVIK AFRLGEDVNW SALLAAYIPV
TDYFLFDTEA GKAYGGTGKR FNWELLQTYP YTHPFYLSGG IGLDETPELL ELQLPALFAV
DVNSRFEDRP GVKNMEKVRL FTDQIQSTYL K