Gene Cpin_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1820 
Symbol 
ID8357971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2225437 
End bp2226573 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content46% 
IMG OID644964008 
Productimidazole glycerol-phosphate dehydratase/histidinol phosphatase 
Protein accessionYP_003121517 
Protein GI256420864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID[TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG TCCTCTTCAT AGACAGAGAT GGTACCATGA TCAAAGAAGT ACCGCCTACT 
TACCAGATTG ACAGCCTTGA AAAGGTGGAG TTCTATCCTA AGGTATTTAC TTATCTGGCC
CGTATTGCAG CGGAGCTGGA TTATGAACTG GCGATGGTTA CCAACCAGGA TGGTCTGGGT
ACCAATAGCT TCCCTGAAGC TGATTTCTGG CCTGCACAGA ATTTTATTCT GCGTTCCTTT
GAGAATGAAG GTGTGAAGTT TGACGAGATT TATATTGACC GTTCTTTTCC GCATGAAAAT
GCACCTACGC GTAAACCACG CACGGGTATG CTGACAAAGT ATTTCTCTCC TGAGTATGAT
CTGGCGAATT CATTTGTGAT CGGTGATCGT ATTACAGATG TAGAACTGGC AAAGAACCTG
GGTGCAAAGG CGATCTGGCT GAATGAAGGT ACCGGTCTTG GCGGCGCTGA AATCAAAGAC
AGTGCGGCTG CATTGAAAGA TACCATTGCG TTGGAATCTA CAGATTGGGA AAAGATCTAT
GAGTTCCTGA AAGTGGGACT GCGTACTGTA ACACATACGC GTACCACTAA AGAAACAGAT
ATCACTATCT CGCTGAACCT CGATGGTACA GGTAAAGCTG ATATCGAAAC AGGTCTGGGT
TTCTTTGATC ATATGCTGGA TCAGATCGCA CGTCATGGCA GCATTGACCT GACGGTAAAA
GCCAAAGGTG ATCTGCATAT TGACGAGCAT CACACAATCG AAGATACCGG TCTGGCACTG
GGAGAAGCAA TCGCACAGGC GCTGGCTGAC AAGAGAGGTA TTGAGCGTTA TGGTTTCTGT
TTGCCGATGG ATGATTGTCT GGCACAGGCT GCTATTGACT TCGGTGGTCG CAACTGGATC
GTATGGGATG CGAAATTTAG CCGTGAGAAG ATAGGAGAGA TGCCGACTGA AATGTTCTTC
CATTTCTTCA AATCATTCTC TGATGCGGCA AAATGTAACC TGAACATTAA AGCGGAAGGT
GAAAACGAAC ACCACAAGAT TGAGGCGATA TTTAAAGTAT TTGCCAAAGC GATCAAGATG
GCGGTAAAAC GCAATCCGAT GAATATGCAG CTGCCAAGCA CGAAAGGCGT ACTGTAA
 
Protein sequence
MKRVLFIDRD GTMIKEVPPT YQIDSLEKVE FYPKVFTYLA RIAAELDYEL AMVTNQDGLG 
TNSFPEADFW PAQNFILRSF ENEGVKFDEI YIDRSFPHEN APTRKPRTGM LTKYFSPEYD
LANSFVIGDR ITDVELAKNL GAKAIWLNEG TGLGGAEIKD SAAALKDTIA LESTDWEKIY
EFLKVGLRTV THTRTTKETD ITISLNLDGT GKADIETGLG FFDHMLDQIA RHGSIDLTVK
AKGDLHIDEH HTIEDTGLAL GEAIAQALAD KRGIERYGFC LPMDDCLAQA AIDFGGRNWI
VWDAKFSREK IGEMPTEMFF HFFKSFSDAA KCNLNIKAEG ENEHHKIEAI FKVFAKAIKM
AVKRNPMNMQ LPSTKGVL