| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1816 |
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| Symbol | |
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| ID | 8357967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2219548 |
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| End bp | 2221803 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644964004 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003121513 |
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| Protein GI | 256420860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC CGAAGCGCCT GCTCGTAGCC ACCCTGCTAC TGGCAGCTCT CAGCGTGAAG
GCACAAACCC CTAAGCAGAC CTTCGTGAAT AGTCTTATTA AGCGGATGAC GCTGGACGAA
AAAATAGGCC AGCTTAACCT GCTCACCAGT GATATGGATG TTACCGGACC ATTTATGAAG
CCGGGATATA AAAAAGACGT TGAAGCCGGT CTTTGCGGCT CCATATTCAA TGCCTATACA
CCGCAATATA CCCGCCAGTT GCAGGAAATG GCCATGAATA CCAGACTGAA AATACCGCTG
TTATTCGGGT ATGATGTTAT CCACGGACAC AAAACGATCT TCCCCATTCC ATTGGGAGAA
GCCTGTACCT GGGATATGGC TCTGCTGGAA CAGAGCGCCC GTATCGCCGC ACAGGAAGCC
AGTGCCGATG GCTTACAATG GACTTACTCC CCAATGGTAG ACATCGCCCG TGACCCCCGC
TGGGGCCGTG TAGCTGAAGG CGTAGGAGAA GATACCTGGT ATGGCGTACA GGTGGCGAAA
GCCAAGGTAA AAGGCTACCA GGGTTCGGAT CTCTCTGCTA ACAATACCAT CCTGGCCTGT
GTAAAGCACT TCGCTTTATA TGGTGCTATT GAAGCGGGCC GCGATTATAA TACGGTAGAC
ATGAGCCGCC GGCAGATGTA CCAGTATTAT CTGCCGCCTT ATAAGGCCGC CATTGATGCT
GGTGTAGCTA CTGCCATGAC TTCCTTTAAT GAGATCGACG GTACGCCGGC TACAGCTAAT
AAATGGCTGC TGACTGACCT CCTGAGGAAA GACTGGGGCT TTAAAGGCTT CGTGGTGACA
GACTATACCG CTATCAATGA AATGATTGCC CACGGAAACG TAAAAGACGA ATATGAAGCA
GGTGCTGCTG CCCTGAATGC CGGCGTCGAT ATGGATATGC AGGGTGGTAT TTTTGCCGGA
CAACTGAAAA AGCTGCTCCA GGACAAAAAG GTGACCCTGA AGGAAATTGA CAGCGCCGTA
TACCGTATTC TGGCGGCTAA ATATGACCTG GGCCTGTTCA AAGACCCTTT CAGGTACTGC
GATACTGTCA GAGCCGCAAA AGAGATTATG TCTGCTGAAA ACCTGGCTGC TGCCCAGAAG
ATCGCAGAGC GCTCTATCGT ATTGCTGAAA AACGAGAACC AGCTGCTGCC CCTGAAGAAG
GAGGCGAAAA TCGCCCTGAT CGGCCCACTG GCTGACAGTC AGCGGGATAT GATCGGCAAC
TGGTCAGCTG CAGGCGACTA TACCAAAGCG GTTACCCTGC TGGAAGCCCT GAAGAAAAGA
TCCGCCAACG TGCAATACCT GCCCGGAGCG CATTATACCC AGGACACCAC CCTTTATAAA
AGAGCCACCC AGAAATTAAA GCTGGATGCA GCAGATACTG CTAATCGTCA GCAGATGCTG
GCAGCGGCTG TTGAACTGGC CAGGAAGTCT GATATCGTGG TAATGTCACT GGGAGAATCC
CAGGGTATGA CCGGAGAGGC TGCCAGCCGT TCTAATATCA GTATTCCGGA AAACCAGCGG
GAGCTGCTGA AGGCGGTATA TGCCACCGGT AAACCGGTAG TCCTGGTATT GTCAAATGGC
CGTCCGATAA CACTGGAATG GGAAAATGCT CACATCCCGG CGATTCTGGA AACCTGGTTC
CTGGGCACAA AAGCCGGTGA TGCCATTGCC TCTGTACTGT TTGGCGACTA CAATCCTGCC
GGTAAGCTGA CCATGAGCTT CCCGCGTAAT GTAGGGCAGA TACCTATCTA CTATAACCAT
AAGAACACGG GCCGTCCGAT GAACCCGTAT AATAAATACT CTTCCAAGTA CCTGGATACG
GAAAATGACC CGCTGTTTCC ATTCGGATAT GGGCTGAGCT ACACTACATT CAGCTATGGA
GACCTGAAAC TGAGCAAACA GCAGATGGCT GCTACAGACA AATTGCACAT CAGCATCCCG
GTGACTAATA ATGGCAATTT TGACGGAGAG GAAGTGGTAC AGTTGTATGT AAGAGACCTG
GTAGGCTCTG TGACCCGCCC GGTAAAAGAG CTGAAAGGCT ATAAAAAGAT CTCCCTGGCA
AAGGGTGAGA CAAAGACCGT GACCTTTGAA CTCTCCGTGG AAGACCTCAA GTTCTATGAC
AAGGATATGC GCTGGAAGGC AGAACCGGGC GATTTTACCG TATTTGTAGG TACAAATAGC
AGGGATGTAC AGTCAGCAGG GTTTACATTA AAATAA
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| Protein sequence | MKNPKRLLVA TLLLAALSVK AQTPKQTFVN SLIKRMTLDE KIGQLNLLTS DMDVTGPFMK
PGYKKDVEAG LCGSIFNAYT PQYTRQLQEM AMNTRLKIPL LFGYDVIHGH KTIFPIPLGE
ACTWDMALLE QSARIAAQEA SADGLQWTYS PMVDIARDPR WGRVAEGVGE DTWYGVQVAK
AKVKGYQGSD LSANNTILAC VKHFALYGAI EAGRDYNTVD MSRRQMYQYY LPPYKAAIDA
GVATAMTSFN EIDGTPATAN KWLLTDLLRK DWGFKGFVVT DYTAINEMIA HGNVKDEYEA
GAAALNAGVD MDMQGGIFAG QLKKLLQDKK VTLKEIDSAV YRILAAKYDL GLFKDPFRYC
DTVRAAKEIM SAENLAAAQK IAERSIVLLK NENQLLPLKK EAKIALIGPL ADSQRDMIGN
WSAAGDYTKA VTLLEALKKR SANVQYLPGA HYTQDTTLYK RATQKLKLDA ADTANRQQML
AAAVELARKS DIVVMSLGES QGMTGEAASR SNISIPENQR ELLKAVYATG KPVVLVLSNG
RPITLEWENA HIPAILETWF LGTKAGDAIA SVLFGDYNPA GKLTMSFPRN VGQIPIYYNH
KNTGRPMNPY NKYSSKYLDT ENDPLFPFGY GLSYTTFSYG DLKLSKQQMA ATDKLHISIP
VTNNGNFDGE EVVQLYVRDL VGSVTRPVKE LKGYKKISLA KGETKTVTFE LSVEDLKFYD
KDMRWKAEPG DFTVFVGTNS RDVQSAGFTL K
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