| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1811 |
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| Symbol | |
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| ID | 8357962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2212706 |
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| End bp | 2215477 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963999 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003121508 |
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| Protein GI | 256420855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.770356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT GCATGGGCAT ATGGCTGCTT TTTTTATCGC TGCAAACCTG GGGACAGCAA
TTACAGGTGG TGCATCTGAG AACGGATAAT AAGACGAATC CCCTTGGATG CCAGCTGTCG
CCCCGTTTAA GCTGGCAGTT GTCAGCCTCG TATAATAATT GCGTACAACA GGCATATCAG
CTGCAATTTT CTGATGATAG TACTACACTC AATAGTAAGA AGCATACAGG TAAGCATGTT
GAAAGCGCGG ATCCTTTTTT GACATTACCG GCCGCCTTTG CTGGTATAAC CTTGTTACCC
GCTCATACTT ATTACTGGCG TGTGCAGGTA TGGGATAAAG CAGGGAGACC TTCCGGATGG
AGTGAAGTCG CCAGTTTTAT AAATGCCCTC AATGGCCCCG CCGACTGGAA AGGCGCCAAA
TGGATAGGGT ATGAGGATGT GGTAGATTCC ATGCGGGTGG TACCAGGTGT GCATAATGGT
ACGGATAAGT TTTACCAGAA ACATAAAGCG AGACAACGGA CTATCGTGCC TTTATTCCGG
AAGGCGTTCA GCGTACAGGG GAAGGTGAAA AGTGCATTGT TGTATATCAG CGGACTGGGA
CAGTATGAAG CGAGTCTGAA TGGTGTGCGG CTGGGAGATA ATTTCCTGGC GCCGGGTTGG
ACGCATTATG ACGAAACAGC GTTGTATAAT ACATACGATC TGACCAATGT GCTGCAGGCA
GGTGAGAATG CATTGGGCGT GATTGTGGGT AATGGATTCT TTAATGTGAA TAAAGAACGG
TACCGCAAGT TGTCGGTTGT GTATGGTATG CCGAGAATGA TCTGCAGGTT GCTGATCACG
TATGAGAATG GAAAGACAAC GAATATTGTT TCGGGTACAG ACTGGAGAAC AAGTGCTTCT
CCCATAACTT TTACCAGCAT CTATGGAGGT GAAGATTATG ATGCCGGAAA AGAACAATCA
GGATGGGATC AGCCTGGATT CAATGATACA GAGTGGAAGC CGGCGATAGT GGTAAAGGCG
ACAGAAAAAC GATTGTTGCC GGAGGAAGAT TATCCGGTGA AAGTGATGGA AGTACTGCCG
GTACGGCGTA TTACACAGCC ACAACCTGCT GTGTATATGT ATGACTTCGG GCAGAATGCA
TCTGGTATTA TCGGTTTGAA GATAAAAGGA AAGAAAGGGC AAACGGTAAA GCTGATACCA
GCAGAATTAA CCAATGATAA ACAGTTGGCT AATCAGAAAG CGACCGGTAG TCCGTATTAT
TTTAGTTATA CTTTAAAAGG TGATGGTATA GAAACCTGGC AACCGCGGTT TTCTTATTAT
GGATTCCGTT ATGTGCAGGT GGAAGGAGCC GCGCCAGATA CCGCTGTGCA TACAGGCGAT
GTGCCAGAAA TCATTTCACT GGAATTGCTG CATACCCGCA ATGCGGCCCC GGTGAATGGA
ACCTTTTCCT GTTCAAATGA TTTATTCAAT CGTATCCATA CATTGATATT ATGGGCGATT
AAAAGCAATA TGCAGAGTGT GTTGACGGAT TGTCCGCATC GGGAAAAACT CAGCTGGCTG
GAACAGGATT ACCTGATGGG TAATGCGATA CAGTATAGTT ATGATATTGA CCTGTTATAT
CGTAAGCTGA TCCGTGATAT GAAAGAAGCG CAGACAGGTG AGGGACTGGT GCCGGATATT
GCACCCGAAT TTGTCTTTTT TGATGATCAT GGTTTTGGGT TCAGGGATTC ACCGGAATGG
GGGAGTGCAG GTGTGATCGT ACCCTGGCTG CACTATCGCT GGTATGGAGA TAAGACTGTC
ATCAGTGATG CATATCCGAT GGTGAAAAAA TATGTGGCAT ACCTGGGTGC AAAAGCGCAA
CACAATATAC TCTCATATGG TCTGGGTGAT TGGTTTGATA ATGGTCCGCA GCGACCGGGC
GTCGCGCAGC TTACCCCTAA GGGCGTCACG GCTACTGCGA TTTACTACTA TGATCTTGTG
CTGGCGGGTA ATATGGCTGA TCTGTTAGGG AAAACAGCGG AGGCAAAGGC GTTCCGGGTG
CAGGCAGATA AAGTGAAAGC GACCTTTAAC GGCGAATATT TCCATACGGG AACGAAGGTA
TATTCAACTG GTAGTCAGAC GGCTATGGCG ATGCCGTTGT GCGTGGGGCT GGTTGAGGAA
CAATACCGTC AGGCGGTGTT CAGTAATATG GTAGATTCCA TTCGTCAGCA GCGTAATCAG
CTGACTGCCG GAGATATTGG CTTTCACTTC CTGGTACAGG CTTTACAGGA AGGAGGGGCG
TCTGATCTGC TGTATGAGAT GAATAACCGG AGTGATGTGC CGGGGTATGG TTTTCAGTTG
GCGAAGGGGG CTACTACTTT GACGGAATCC TGGGCCGCAC TGGAGCAGGT GTCTAATAAT
CACCTGATGT TGGGACATCT GTTGGAATGG TTTTACACCG GATTAGGAGG TATTACGCAA
CAGGCGGGTT CAATAGGGTA TAAACAGCTT CAGATCTGTC CGGAGGTAGT GGGTGACATT
ACCTGGGTTA AAACATCCTA TAATACCCCT TACGGCACTG TGCGTAGTGA ATGGGAGAAG
AAAGATGGCG GGATGTTGTT TCGTATCAGT ATTCCCCCTA ATAGCAATGC GATTGTTAAG
CTGCCGGCTA AAAGGGAGGG GCGTATAACC GCAGATGGAA AGCCACTGAA CAATCAGGAT
TTATCCTTCG AAAAAGAGAG GGTTGTAATG TATTTAGGTT CAGGTGATTA TGAGTTTTCT
ACGTTCAAAT AA
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| Protein sequence | MKQCMGIWLL FLSLQTWGQQ LQVVHLRTDN KTNPLGCQLS PRLSWQLSAS YNNCVQQAYQ
LQFSDDSTTL NSKKHTGKHV ESADPFLTLP AAFAGITLLP AHTYYWRVQV WDKAGRPSGW
SEVASFINAL NGPADWKGAK WIGYEDVVDS MRVVPGVHNG TDKFYQKHKA RQRTIVPLFR
KAFSVQGKVK SALLYISGLG QYEASLNGVR LGDNFLAPGW THYDETALYN TYDLTNVLQA
GENALGVIVG NGFFNVNKER YRKLSVVYGM PRMICRLLIT YENGKTTNIV SGTDWRTSAS
PITFTSIYGG EDYDAGKEQS GWDQPGFNDT EWKPAIVVKA TEKRLLPEED YPVKVMEVLP
VRRITQPQPA VYMYDFGQNA SGIIGLKIKG KKGQTVKLIP AELTNDKQLA NQKATGSPYY
FSYTLKGDGI ETWQPRFSYY GFRYVQVEGA APDTAVHTGD VPEIISLELL HTRNAAPVNG
TFSCSNDLFN RIHTLILWAI KSNMQSVLTD CPHREKLSWL EQDYLMGNAI QYSYDIDLLY
RKLIRDMKEA QTGEGLVPDI APEFVFFDDH GFGFRDSPEW GSAGVIVPWL HYRWYGDKTV
ISDAYPMVKK YVAYLGAKAQ HNILSYGLGD WFDNGPQRPG VAQLTPKGVT ATAIYYYDLV
LAGNMADLLG KTAEAKAFRV QADKVKATFN GEYFHTGTKV YSTGSQTAMA MPLCVGLVEE
QYRQAVFSNM VDSIRQQRNQ LTAGDIGFHF LVQALQEGGA SDLLYEMNNR SDVPGYGFQL
AKGATTLTES WAALEQVSNN HLMLGHLLEW FYTGLGGITQ QAGSIGYKQL QICPEVVGDI
TWVKTSYNTP YGTVRSEWEK KDGGMLFRIS IPPNSNAIVK LPAKREGRIT ADGKPLNNQD
LSFEKERVVM YLGSGDYEFS TFK
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