| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1809 |
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| Symbol | |
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| ID | 8357960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2205938 |
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| End bp | 2210308 |
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| Gene Length | 4371 bp |
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| Protein Length | 1456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963997 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003121506 |
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| Protein GI | 256420853 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.440547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT ATTGCTTACT GATCATATTG CTGATAAGTG TATATGCCGG CAAGGCGCAA
AATCTGGACA GTCTGTTCTG GCAGCCGCCT GCTATGGCCA AACCCTGGGT ATTCTGGTAC
TGGATGCATG CCAGTATATC AAAGGAGGGT ATTACAGCCG ATCTGGAAGC AATGAAAGAA
GCAGGTATTG GCGGTGCATA CCTGATGCCG ATCAAGGGGA AAGCCAATCC GCCTTATATC
AATCCACCTG TAGAGCAGTT AAGTCCTGCC TGGTGGGAAA TGGTGCGCTT TGCACATAGT
GAAGCTGCCC GTCTTGGCTT ACAGCTGGGG ATGCATTTTA GTGACGGATT TGCGCTTGCA
GGAGGTCCCT GGATCACACC CGCCCAGTCT ATGCAGAAAG TGGTATGGTC AGCTACAGCT
GTTAAAGGAG GGACTGACTT TAATGAGATA CTATCCCAGC CACCTGTCAA TGAAAAATAC
TATCGCGATA TAGCCGTACT GGCATTTCCT TCGGTAGCTC CGCAGCCACA AACACCAGTG
GTGACGACCA GTCTGCCGGG TGTAGCCGCT CAATTCCTGG CACTGCCGGG TAGTAAGGAA
AGTTTTCGCA GTCAGGATCC CTGCTGGATC CAATATGCTT ATGAAAAACC CTTTACCTGC
TATGCGATCA CGATCAACAC AAATGGTAAC AATTACCAGT CGCATCGCCT GCGTATTGCC
GTAAGTGACA ATGGTGTGGA TTTTCGCCCT GCGGGTAAAC TGGAAGCACC TCGCCATGGT
TGGCAGGATA CCGATGCTCC GGTGACACAT GCAATTACAC CCGTCACTGC CCGTTACTTC
CGTTTTTATT ATGATAAAGA AGGTGCAGAA CCAGGGTCAG AAGACCTGGA TGCGGCGAAA
TGGAAACAAA GTCTGAAGGT GGCAGGTATC CTCTTATCTG ATCAGCCGCG TATTCATCAG
TTTGAGGGCA AGAGTGGTGC TGTATGGCGT ATCAGTCCGT ATACCACGAC AGCACAATTG
CCAGAGAAAG ATTGTATTCC CCTGAATAAA ATTATTGATC TCACGCAGCA ACTCGATGCT
GGCGGACGTC TGCATTGGAA AGCGCCTGCC GGTAACTGGA CGATATTGCG TATCGGTCAT
ACCTCTACCG GACATACCAA TGCAACTGGT GGCGCAGGTA GCGGACTGGA ATGTGATAAA
TTCAGCAGTG CCGCTGTACG AGTACAGTTT GATCACTGGT TTGGAGAGGC GAGACGTAAA
ATAGGTCATG CACTGGCGGA TACTGTATTG AAAGTATTTC ATGTGGATAG CTGGGAATGT
GGCAGTCAGA ACTGGTCAGC CGGTTTTCGT GATGAATTCC GCCGTCGACG TGGATATGAC
CTGTTACGTT ATCTACCGGC AATGGCAGGT TATCCGGTAC AAAACGCACA AACTGCCGAG
ACCTTTTTAC ATGATGTGAG AGCTACGATC ACAGAACTTG TACAACAAAA CTTTTATGAT
ACATTGACGG CATTGGCTCA CACACATGGC TGTCTGTTTA CAGCTGAAAG TGTAGCGCCT
GTGATGCCGG GAGACGGTAT GCAGCATTAT CAGTCCGCCG ATATACCTAT GGGCGAATAC
TGGCTGCGGA GTCCGACGCA TGATAAACCC AATGATATGC TGGATGCTAT TTCCGGTGCG
CATATTTATG GCAAACAGGT TATACAGGCA GAAGCGTTTA CAGAACTACG GATGCGCTGG
GATGAACATC CGGGTATGCT GAAGTCACTC GCAGACCGCA ATTATGCGCT GGGTATTAAC
AAACTGGTGT ATCATGTTTT CGCACATAAT CCCTGGACGG ACAGGCAACC GGGAATGACG
CTGGATGGTA TCGGGTTATA TTTTCAACGT AATCAGACCT GGTGGAAACC AGGAAAGGCC
TGGGTTACTT ATGCACAGCG GTGTCAGGCT TTATTGCAAC AGGGAAGACC GGTTGCAGAT
ATTGCTGTAT TTACAGGAGA AGAGATCCCT CGCAGAGCGA TATTACCGGA ACGGCTGGTA
AATATATTGC CGGGATTGTT TGGTGATAGT CTGCTGGCTT TTGAATCACA GCGGATGGCC
AACACAGGCG GTCCTTTAAG AGAAATGCCT CTAGGCGTTA CCGCATCTGC AAATATCACA
GATCCAGTTA ACTGGGTAGA TGCCCTACAG GGATATCACT ATGACTCATT CAACAAAGAT
GCCTTACTAA GACTGGCTAC TGTTAAAGAT GGCAACATTG TATTGCCGGG AGGCGCTGTG
TACAGGCTGT TAATATTGCC CGGTGTAATG GCCATGTCGC CGGAAGGAAA TCTGTTATCC
CGTGAGACGG TCTTTCATCT CAGAAGATTA GTGTCCCAGG GAGGAACGGT GATGGTGAAT
GGTCCGTTAA GATCACTGGA AGCCCCTGAC AGTATGATTG TATTGCAAGG AAAAGATGTA
TTGCAGGGAC CATGGCGCAA TACCTCTTTT GCTGCATTAG GGTTAATGCC TGATCTGCTG
GTGAAGGAAA CGAGTGGTAA CAGGGCCAAT GGCATTGCAT GGACACATCG TACTGCACCT
GATTATGATA TTTACTTTAT CTCCAATCAA CAGGAGATAG CGCGTACCAT TCAACTGTCC
TTCCGTGTCA GTGGTAAACT GCCTGAAATA TGGGATGCCG TTACCGGTGA ACAACGTACA
GCAACGGACT GGCAAATAGT TGCTGGTCGT ACAGAACTGT CTTTACAACT GCCTGCCAGT
GGTTCATTGT TTGTTATTTT CCGCAAACCT ACTCCGCAGT CATCCATGCA TCATGCGCCT
AACTGGCCAG CATTCAATAC AATTAATACC CTGAATAATG ACTGGAAAGT CAGTTTTGAC
AGTGCGGTTG GCGGCCCTTC AGCTCCCGTG GTATTCAATG AACTGAAGGA CTGGAGTAAA
GATGATAATG ACCAGATCCG GTATTATTCC GGTACCGCGT ATTATAGAAA GACTTTCAAC
TGGAACAGGC GGAAACAGGA TACTATCTCC CGTGTATTCC TGGATCTGGG CAAGGTGGCT
AATCTGGCAG CTGTAAAGGT AAATGGGCTT GATTGTGGTA TCACCTGGAC GCCTCCATAT
AAAGTCGATA TTACCACTGC TATTCGTGAA GGAGACAATG AACTGGAAGT AGCTGTGACA
AATACCTGGG CGAATCGTCT GATTGGCGAT ACTGCATTGC CTGTGGATAA ACGTATCACC
CGTACAACAG CGCCTTTAAA ACTGGATAAG ACGCCATTAC AGGAAGCTGG TTTACTCGGA
CCTGTTGTAT TGCAACAGGA ACGTGTGACG GCAGGTGGAG AAGTGGCGCA ATCAGTTATG
CAGCAGGTTT ACCAGGAGAT AAAAACGCCT TATAAATACG GAATGGTGAT GGTGCCTGCA
GATGATAGCA AGAAGCTGGA TTGTCCGAGT ATTTTCAGGA AAGGCCGCAA GTGGTACATG
GTGTATATCA TCTATAATGA AGGTCGCGGT TATGAAACCT GGCTGGCAGA AAGTAAGGAC
CTGTTACACT GGAAGACCAA AGGCAAAATG ATGTCATTTG CAGATAGTTC TACTACCTGG
GATGTCAATC AGCGTGCAGG TTATATCTCT TTACAGGATC ATGTATGGGG AGGTAATTAT
AAGTGGTACT CCTACAAAGG GAAACACTGG ATGAGTTATA TCGGTGGTGC GCAGCATGGC
TATGAACAGG GCTTATTGTC TTTGGGTATT GCCAATACCC GCAAACGTAT TACCCGGGCG
CATGAGTGGA AAAGATTAGA TAAACCTGCC TTGATGGCGA CAGACAGTAA CGCAGGCTGG
TGGGAGAATA ATACTATTTA CAAGAGTTCT GTCATCTGGG ATCAGACGAA TACCACCGCA
CATCCTTTTG TGATGTATTA CAATGCAAAG GGGGATAGTC TGAAACCTAA ACGGGGAAAA
GAACGTATCG GTATGGCAGT CTCAGACGAT ATGGAACATT GGAGCAGATA TGGTAAAGAT
CCTGTACTGG ATCACTTTAC AGGTATCACC GGCGATGCGG TGATACAACG TATGGACAAT
ATGTGGATCA TGTTTTATTT CGGCGCTTTC TGGAAGAACC GGCCTACTGC CTTTAACCGT
TTCGCCTGTT CATATGATCT GGTGCATTGG AGCGATTGGA ATGGCCCGGA CCTGATCAAT
TCTACAGAAG ATTATGATGG TCGTTTTGCA CATAAATCAT TTGTGATCAA ATATAAAGGA
GTGGTATATC ATTACTACTG CGCGGTGAAT CAGAAAGACC AGCGGGGTAT TGCGGTAGCC
ACATCTAAAG ACCTTGGAAA AAGTACACTT CATTTCATAA AAGCTAAATA G
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| Protein sequence | MKKYCLLIIL LISVYAGKAQ NLDSLFWQPP AMAKPWVFWY WMHASISKEG ITADLEAMKE
AGIGGAYLMP IKGKANPPYI NPPVEQLSPA WWEMVRFAHS EAARLGLQLG MHFSDGFALA
GGPWITPAQS MQKVVWSATA VKGGTDFNEI LSQPPVNEKY YRDIAVLAFP SVAPQPQTPV
VTTSLPGVAA QFLALPGSKE SFRSQDPCWI QYAYEKPFTC YAITINTNGN NYQSHRLRIA
VSDNGVDFRP AGKLEAPRHG WQDTDAPVTH AITPVTARYF RFYYDKEGAE PGSEDLDAAK
WKQSLKVAGI LLSDQPRIHQ FEGKSGAVWR ISPYTTTAQL PEKDCIPLNK IIDLTQQLDA
GGRLHWKAPA GNWTILRIGH TSTGHTNATG GAGSGLECDK FSSAAVRVQF DHWFGEARRK
IGHALADTVL KVFHVDSWEC GSQNWSAGFR DEFRRRRGYD LLRYLPAMAG YPVQNAQTAE
TFLHDVRATI TELVQQNFYD TLTALAHTHG CLFTAESVAP VMPGDGMQHY QSADIPMGEY
WLRSPTHDKP NDMLDAISGA HIYGKQVIQA EAFTELRMRW DEHPGMLKSL ADRNYALGIN
KLVYHVFAHN PWTDRQPGMT LDGIGLYFQR NQTWWKPGKA WVTYAQRCQA LLQQGRPVAD
IAVFTGEEIP RRAILPERLV NILPGLFGDS LLAFESQRMA NTGGPLREMP LGVTASANIT
DPVNWVDALQ GYHYDSFNKD ALLRLATVKD GNIVLPGGAV YRLLILPGVM AMSPEGNLLS
RETVFHLRRL VSQGGTVMVN GPLRSLEAPD SMIVLQGKDV LQGPWRNTSF AALGLMPDLL
VKETSGNRAN GIAWTHRTAP DYDIYFISNQ QEIARTIQLS FRVSGKLPEI WDAVTGEQRT
ATDWQIVAGR TELSLQLPAS GSLFVIFRKP TPQSSMHHAP NWPAFNTINT LNNDWKVSFD
SAVGGPSAPV VFNELKDWSK DDNDQIRYYS GTAYYRKTFN WNRRKQDTIS RVFLDLGKVA
NLAAVKVNGL DCGITWTPPY KVDITTAIRE GDNELEVAVT NTWANRLIGD TALPVDKRIT
RTTAPLKLDK TPLQEAGLLG PVVLQQERVT AGGEVAQSVM QQVYQEIKTP YKYGMVMVPA
DDSKKLDCPS IFRKGRKWYM VYIIYNEGRG YETWLAESKD LLHWKTKGKM MSFADSSTTW
DVNQRAGYIS LQDHVWGGNY KWYSYKGKHW MSYIGGAQHG YEQGLLSLGI ANTRKRITRA
HEWKRLDKPA LMATDSNAGW WENNTIYKSS VIWDQTNTTA HPFVMYYNAK GDSLKPKRGK
ERIGMAVSDD MEHWSRYGKD PVLDHFTGIT GDAVIQRMDN MWIMFYFGAF WKNRPTAFNR
FACSYDLVHW SDWNGPDLIN STEDYDGRFA HKSFVIKYKG VVYHYYCAVN QKDQRGIAVA
TSKDLGKSTL HFIKAK
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