Gene Cpin_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1805 
Symbol 
ID8357956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2198481 
End bp2199383 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID644963993 
Producthypothetical protein 
Protein accessionYP_003121502 
Protein GI256420849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00065967 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT TTGCTCTCTA TATATCGATT ATTCTGCTTG CGGCCTGCCG TAGTAACAAA 
GAAGTGTACA TGTTCACTTC TTTTCATGAA CCCGGCAAAG ATGGTTTGCA TTTCCTGTAT
AGTTACGATG GCTATAAATG GGATAGCCTT CGTGGCAGTT TCCTGCATCC CCGGACGGGA
AAAGATAAGA TCATGCGCGA TCCCAGCATG GTGAAAGGAC CTGATGGTAC TTTCCACCTG
GTATGGACGA GCAGCTGGAA AGGGGATAAA GGATTCGGTT ATGCATCTTC AAAGGATCTG
CAACACTGGA CGCCGCAGCA GTTTATTCCT GTAATGGAAC ACGAGCCGCT AACTGTAAAT
GTCTGGGCGC CCGAGTTGTT CTATGACGAT GTGGAAAAGC AGTTCATCAT TATCTGGGCA
TCCTGTATAC CAGGACGTTT TGAAAAAGGA ATTGAAGCGG AGGATAATAA CCACAGGATG
TATTACACGA CTACCAAAGA CTTTAAAACA TTCTCCCGGG CTAAGTTATT CCTCGATCCG
GGTTTTAGTG TGATAGATGC TGTGATCGTA CAAACAAGAC CTCAGGCATA CACACTGGTG
TTGAAGGATA ATACCCGTAA TGAAAGAGAT CTGAAAGTGG CTTTTGCTAA ACATCCTTTA
GGTCCTTATC AGGAGGTATC TGTACCATTT ACCGGAAAAC TGACAGAAGG GCCTACCGTG
TTAAAAGCCG GAAAGGACTG GTTGATCTAC TACGATGATT ATGGCAATAA ACGCTATGGG
GCTGTTGCTA CTACCGACTT CCATACGTTC AGAGATATCA ATGCCAGCAT CGTAATACCT
GAAGGACATA AACATGGTAC CGTGTTTAAA GTCCGCCGTA AAATATTGGA TAAGCTCAAA
TGA
 
Protein sequence
MKRFALYISI ILLAACRSNK EVYMFTSFHE PGKDGLHFLY SYDGYKWDSL RGSFLHPRTG 
KDKIMRDPSM VKGPDGTFHL VWTSSWKGDK GFGYASSKDL QHWTPQQFIP VMEHEPLTVN
VWAPELFYDD VEKQFIIIWA SCIPGRFEKG IEAEDNNHRM YYTTTKDFKT FSRAKLFLDP
GFSVIDAVIV QTRPQAYTLV LKDNTRNERD LKVAFAKHPL GPYQEVSVPF TGKLTEGPTV
LKAGKDWLIY YDDYGNKRYG AVATTDFHTF RDINASIVIP EGHKHGTVFK VRRKILDKLK