Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1805 |
Symbol | |
ID | 8357956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2198481 |
End bp | 2199383 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963993 |
Product | hypothetical protein |
Protein accession | YP_003121502 |
Protein GI | 256420849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00065967 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT TTGCTCTCTA TATATCGATT ATTCTGCTTG CGGCCTGCCG TAGTAACAAA GAAGTGTACA TGTTCACTTC TTTTCATGAA CCCGGCAAAG ATGGTTTGCA TTTCCTGTAT AGTTACGATG GCTATAAATG GGATAGCCTT CGTGGCAGTT TCCTGCATCC CCGGACGGGA AAAGATAAGA TCATGCGCGA TCCCAGCATG GTGAAAGGAC CTGATGGTAC TTTCCACCTG GTATGGACGA GCAGCTGGAA AGGGGATAAA GGATTCGGTT ATGCATCTTC AAAGGATCTG CAACACTGGA CGCCGCAGCA GTTTATTCCT GTAATGGAAC ACGAGCCGCT AACTGTAAAT GTCTGGGCGC CCGAGTTGTT CTATGACGAT GTGGAAAAGC AGTTCATCAT TATCTGGGCA TCCTGTATAC CAGGACGTTT TGAAAAAGGA ATTGAAGCGG AGGATAATAA CCACAGGATG TATTACACGA CTACCAAAGA CTTTAAAACA TTCTCCCGGG CTAAGTTATT CCTCGATCCG GGTTTTAGTG TGATAGATGC TGTGATCGTA CAAACAAGAC CTCAGGCATA CACACTGGTG TTGAAGGATA ATACCCGTAA TGAAAGAGAT CTGAAAGTGG CTTTTGCTAA ACATCCTTTA GGTCCTTATC AGGAGGTATC TGTACCATTT ACCGGAAAAC TGACAGAAGG GCCTACCGTG TTAAAAGCCG GAAAGGACTG GTTGATCTAC TACGATGATT ATGGCAATAA ACGCTATGGG GCTGTTGCTA CTACCGACTT CCATACGTTC AGAGATATCA ATGCCAGCAT CGTAATACCT GAAGGACATA AACATGGTAC CGTGTTTAAA GTCCGCCGTA AAATATTGGA TAAGCTCAAA TGA
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Protein sequence | MKRFALYISI ILLAACRSNK EVYMFTSFHE PGKDGLHFLY SYDGYKWDSL RGSFLHPRTG KDKIMRDPSM VKGPDGTFHL VWTSSWKGDK GFGYASSKDL QHWTPQQFIP VMEHEPLTVN VWAPELFYDD VEKQFIIIWA SCIPGRFEKG IEAEDNNHRM YYTTTKDFKT FSRAKLFLDP GFSVIDAVIV QTRPQAYTLV LKDNTRNERD LKVAFAKHPL GPYQEVSVPF TGKLTEGPTV LKAGKDWLIY YDDYGNKRYG AVATTDFHTF RDINASIVIP EGHKHGTVFK VRRKILDKLK
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