| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1801 |
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| Symbol | |
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| ID | 8357952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2190033 |
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| End bp | 2191796 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963989 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003121498 |
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| Protein GI | 256420845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAT TATTCAGCTA TATATTACTG ACCGTCAGTC TGACCGCGTG CTCAGATATA
CTTGATAAGA CAGACCTGAC AGGGATTGAC GAGCGTACAT GGGATAATGA ATCTACCGCT
ACACTGTACC TGAACAGGGT ATATGATCTG TCAATGCCTA CATGGCCTAA TCTGGCCAGC
GCTGCGACAC TGCCCACCGC TATTCATGAT ATCTCCGATG ATTATAATGG CGGCGATCAG
AAGATCTGGT ATGGTACTTT GTCTGTGGAT AACATCACAG ATTTCTTTGG TGGAAATGCG
TCCAATAATG TGTGGGCTTA TATCCGTAAA ACCAATATCC TGCTGACAGA AATCGAGAAA
GGACCTTTGC CGCAGGATGT TAAAACAAAG ATCAAATCAC AGGCGTATTT CCTGAGAGGA
TGGTTATATT TCCAGTTGAT CAAGCTGTAT GGCGGTGTGC CTTACATCAG TCATCCGCAG
GACTGGGTAA CAGAAAACCT GTTCGTTACC AGGAATAAAA CTTCTGAATG TATTGACTCC
ATTGCCAGGG ATTTTGATAT GGCGACCGCT TTACCGGGTA ACTGGGGTAC TGCCGATAAG
GGCAGGATCA CCCGTGGCGC GGCATTAGGT GTAAAAGGCC GTATGCTGTT ATATTGGGCA
AGTCCGCAGT TTAACCCGAA TAACGACCCT GCACGCTGGG AAAGGGCTTA TAAAGCCAAC
AGAGCAGCAT ATGATACACT GGTGTTGGAT GGCTACGGAT TGTTCTCTAA CTATGCGAAC
ATCTGGCTGG ATGAAGGAAC AGGTAACAAG GAAGTGATCC TGCTTCGTTC GTTTGACGGT
GCTACCAAGG CCAGCACCTT TGATGATGCT GCCCGTCCGA ACTCTGAGTC AAATGGTGGC
GGAGGATCTT ATCAGCCTAC CCTTGAACTG GTGAATACGT ACCCTACAAT AGACGGTTTA
CCGATCACGG ATCCTAATTC CGGTTATGAT CCTGTATATT ACTGGAAGAA CCGTGATCCT
CGTTTTGATG CCACTATTGC CTACAATGGC TGTATATGGC CGCTGAGTAA TAAAACAGGG
CGTAAGCAGT GGAACTATGT TGGGGTAACT GAAGACAAAA ACAAACCTAC TGCAACAGGT
TTCTATTGCC GTAAAAATGT CAATACATCT ATCATCAAGG ATAACACCAA GCTGGGTAAG
ACCGACTGGA TCGAAATGCG TTTCGCAGAA GTAATGCTGA ACCTGGCGGA GTGTGCCAAT
GCCACCGGCC GTACACAGGA GGCTTACGAC ATGCTGACTG CTATCCGTAA GAGAGCTGGT
ATCCGTCCGG GTGAAGGTGG TACCTACGGC CTGAAACAAG GTATGTCCAG GGATGAAATG
TTTGAGACGA TTATGAACGA GCGCCGTATC GAACTGGCAT TCGAAGGCAA ACGTTATGAT
GACCTGCGCC GTAATAAACT GTTTGATAAA CTGAACGGTA AGAAACGTTC CATCCTGAAG
ATCACTATCA ATGCACCTTA TACGGTGGCC GATCTGGAAA AACCAGACGC GACCGGTATT
CCGCTGCGTG ATAAACTGGA TCTGAACGGA CCGGATTATA CAACGTATTT TACAGCTACA
GTTGATGTGC TGGATACGCA GAAGCCGATC AACTATCCGT CCAACTATTA TTTTTACGCC
ATTCCTACTA CCAATATTAC CAGGAACCCA AGTCTTGTAC AGACGACAGG CTGGACGAGT
GGCGGCTTTA ATCCATTAGA CTAA
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| Protein sequence | MRKLFSYILL TVSLTACSDI LDKTDLTGID ERTWDNESTA TLYLNRVYDL SMPTWPNLAS
AATLPTAIHD ISDDYNGGDQ KIWYGTLSVD NITDFFGGNA SNNVWAYIRK TNILLTEIEK
GPLPQDVKTK IKSQAYFLRG WLYFQLIKLY GGVPYISHPQ DWVTENLFVT RNKTSECIDS
IARDFDMATA LPGNWGTADK GRITRGAALG VKGRMLLYWA SPQFNPNNDP ARWERAYKAN
RAAYDTLVLD GYGLFSNYAN IWLDEGTGNK EVILLRSFDG ATKASTFDDA ARPNSESNGG
GGSYQPTLEL VNTYPTIDGL PITDPNSGYD PVYYWKNRDP RFDATIAYNG CIWPLSNKTG
RKQWNYVGVT EDKNKPTATG FYCRKNVNTS IIKDNTKLGK TDWIEMRFAE VMLNLAECAN
ATGRTQEAYD MLTAIRKRAG IRPGEGGTYG LKQGMSRDEM FETIMNERRI ELAFEGKRYD
DLRRNKLFDK LNGKKRSILK ITINAPYTVA DLEKPDATGI PLRDKLDLNG PDYTTYFTAT
VDVLDTQKPI NYPSNYYFYA IPTTNITRNP SLVQTTGWTS GGFNPLD
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